Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_1609 |
Symbol | |
ID | 1183246 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 1763976 |
End bp | 1764284 |
Gene Length | 309 bp |
Protein Length | 102 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 637392981 |
Product | hypothetical protein |
Protein accession | NP_791434 |
Protein GI | 28868815 |
COG category | [S] Function unknown |
COG ID | [COG3212] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACTTA TGCCTGCCCT CTTCGCTGCT GTTGCCCTCA CTGCTGCTGC CGGTGCTGCC CAAGCCGATA TTGGTCCCGA TGAAGTAGTT CGCCTGCACA AGGCGGGCAC AGTAGGTGAC TTCGAACAGT TCAACAAACA GGCTCTGGCT GCACACCCCG GCTTCACGAT CCACGATACC GAGCTGGACA AGACCGTTAC TGGCCAACTC GTTTATCAGA TCGAGCTGAA AGGTCCTAAT CGCGTTGAAT GGAACTACGA CGTTGACGCC AAGACCGGCA AAGTGGTGCG TGACGCGCAA GATCATTAA
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Protein sequence | MKLMPALFAA VALTAAAGAA QADIGPDEVV RLHKAGTVGD FEQFNKQALA AHPGFTIHDT ELDKTVTGQL VYQIELKGPN RVEWNYDVDA KTGKVVRDAQ DH
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