Gene PSPTO_1609 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_1609 
Symbol 
ID1183246 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp1763976 
End bp1764284 
Gene Length309 bp 
Protein Length102 aa 
Translation table11 
GC content55% 
IMG OID637392981 
Producthypothetical protein 
Protein accessionNP_791434 
Protein GI28868815 
COG category[S] Function unknown 
COG ID[COG3212] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACTTA TGCCTGCCCT CTTCGCTGCT GTTGCCCTCA CTGCTGCTGC CGGTGCTGCC 
CAAGCCGATA TTGGTCCCGA TGAAGTAGTT CGCCTGCACA AGGCGGGCAC AGTAGGTGAC
TTCGAACAGT TCAACAAACA GGCTCTGGCT GCACACCCCG GCTTCACGAT CCACGATACC
GAGCTGGACA AGACCGTTAC TGGCCAACTC GTTTATCAGA TCGAGCTGAA AGGTCCTAAT
CGCGTTGAAT GGAACTACGA CGTTGACGCC AAGACCGGCA AAGTGGTGCG TGACGCGCAA
GATCATTAA
 
Protein sequence
MKLMPALFAA VALTAAAGAA QADIGPDEVV RLHKAGTVGD FEQFNKQALA AHPGFTIHDT 
ELDKTVTGQL VYQIELKGPN RVEWNYDVDA KTGKVVRDAQ DH