Gene PSPTO_1604 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_1604 
Symbol 
ID1183241 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp1758790 
End bp1759611 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content59% 
IMG OID637392976 
Producthydrolase, putative 
Protein accessionNP_791429 
Protein GI28868810 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.626551 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGGTCC AACAGCGCAA TAACGTCAAC ATCATGGGCG ATGGACCGGC CACTCTGATT 
TTTGCTCATG GATTTGGCTG CGATCAGCAC ATGTGGCGTT TTATGGCGCC TCACTTTGCC
GAGCGCTTCA AGGTTGTGCT CTTTGACCTG GTGGGCAGCG GCAACTCCGA TGTGTCGGCC
TGGTACCCGC ACAAATACGC CTCGCTCAAG GGCTACGCCA CTGACTTGCT GGAACTGGCC
GACGAGTTCG CCGGAACCGG GCCGGTGGTG CATATCGGTC ACTCGGTCAG TTGCATGATC
GCCGTGCTCG CCGAGCTTCA GTCGCCAAGC CGGTTCGACA GCCACATCAT GGTCGGTCCT
TCGCCTCACT ACCTCAACGA CGGCGATTAC CTGGGCGGTT TTACCCGCGC TGACGTGGAC
TCGCTGCTGG AAACCCTGGA AAGCAATTAC CTGGGCTGGG CCAGCACCAT GGCGCCGACG
TTGATGGGGG CTGGCGACCG GCCGGAACTG AGCGAAGAAC TCGCCAGCAG TTTTTGTCGC
ACCAATGCCG AAATCGCCAA GCAGTTTGCT CGCGTGACGT TCCTCTCCGA CCATCGTGCC
GATGTTGCGC GATTCAACAG CAGGACGCTC ATTTTGCAAA GCAGCGACGA TCTGGTCGTG
CCAGTGCAGG TCGGCGAGTA TCTGCACCAT GTGATCGCCG ACAGCGCCTT GCACATGATC
GACAACGTCG GGCATTACCC GCACATGAGT GCGCCGCAAG AGTGTATTAC GGCCATGAAT
CTGTTTCTGG CACCTTACGA GAGCCCTGAT CATGCTGCTT GA
 
Protein sequence
MSVQQRNNVN IMGDGPATLI FAHGFGCDQH MWRFMAPHFA ERFKVVLFDL VGSGNSDVSA 
WYPHKYASLK GYATDLLELA DEFAGTGPVV HIGHSVSCMI AVLAELQSPS RFDSHIMVGP
SPHYLNDGDY LGGFTRADVD SLLETLESNY LGWASTMAPT LMGAGDRPEL SEELASSFCR
TNAEIAKQFA RVTFLSDHRA DVARFNSRTL ILQSSDDLVV PVQVGEYLHH VIADSALHMI
DNVGHYPHMS APQECITAMN LFLAPYESPD HAA