Gene PSPTO_1581 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_1581 
Symbol 
ID1183218 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand- 
Start bp1741579 
End bp1742217 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content55% 
IMG OID637392953 
Producthypothetical protein 
Protein accessionNP_791406 
Protein GI28868787 
COG category[S] Function unknown 
COG ID[COG4925] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.191154 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCACAGAC GAAGCGCGAA CATTCATGAG CAATGTTCAT CTCAGCATGT ACTCCCACGC 
AGACAAGAAA CCGCTGCGCA CCCGGTATGC TTCTTTCACA GCATTTCTCG GGGGAACAAC 
GCCATGGCAG ACGCACGAGT GAGACCTTCA AAAACAGAGC AATTCGCAGG CCTGACGTTA 
TCGGCCTGTC TGGGATTGAG CCTTTTGATA CCGTTTATTC CAGGCACGGC TTTCGCACAA 
CAACCCTATT CCTCATCGCC GAGTCATAAC GTTCAGGAGC GCAGTATGAA CATCAGCATG 
ATTGCCGACG ACAAGGTCGT CACGTTTCAT CTGGAAGACA GCGCAACAAC CAGAGACTTT 
GTCGCGATGC TGCCGCTTGA ACTCACGCTG GAAGACTACG CTGCCACCGA GAAGATCGGC 
ACGCTCGCGC GCAAGCTGGA CGTGAGCGGT GCGGCGGCTG GCAGCACGCC AGTCGAGGGC 
GATATTGCCT ATTACGCGCC GTGGGGCAAT CTGGCGATTT ACCACAAAGG CTTTGAATAC 
TCGCCAGGGC TGGTGAGGCT GGGCAGAATC GAATCAGGCA TGGAAACCAT CCGAAAGCCA 
GGCGCTGTGG CGGTCAGATT TGAAGTCGCA AAAGACTGA
 
Protein sequence
MHRRSANIHE QCSSQHVLPR RQETAAHPVC FFHSISRGNN AMADARVRPS KTEQFAGLTL 
SACLGLSLLI PFIPGTAFAQ QPYSSSPSHN VQERSMNISM IADDKVVTFH LEDSATTRDF 
VAMLPLELTL EDYAATEKIG TLARKLDVSG AAAGSTPVEG DIAYYAPWGN LAIYHKGFEY 
SPGLVRLGRI ESGMETIRKP GAVAVRFEVA KD