| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1524 |
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| Symbol | |
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| ID | 1183161 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 1680211 |
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| End bp | 1682739 |
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| Gene Length | 2529 bp |
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| Protein Length | 842 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 637392896 |
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| Product | glycosyl transferase, group 2 family protein |
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| Protein accession | NP_791349 |
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| Protein GI | 28868730 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG5309] Exo-beta-1,3-glucanase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.566497 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGATAT ACCGCATGGA GCACAGTTTA GACATGAATA AAAAAATATC AGACGCTCCA
ATCTGGCCGG TCAACTCATT CAAATCCGTC GTGACCAAAG TCCCGGACTG GCCTGACAGC
ATCTCGGGCC TTGCCTATAA CCCCTTTCGT CCCGGACAAA GTCCCTACAA GCACATCTAT
CCGACCCGCG AGCAAATCAA AGAAGACTTG CTGCTGATCC GCCCGTTGAC TCGACATGTA
AGAACCTACT CGGTCGAGCA GACGCTGGCC TGTATTCCCG AAATAGCCGA AGAACTCGGC
ATGAGTGTCA CACTCGGCAT ATGGATAGGC TGGGACGAAA AACGCAATGA TCGGGAACTG
ATCGAGGGCG TGAAGCTTGC CAATCAGTAT CCCAGCGTCC GGCGTCTGAT CATCGGAAAT
GAAACATTAC TGCGCAATGA CGTCACCGTC AGCCAACTGA TCGATTACAT GCAAACGGCA
CGACAAGGTG TCAACGTTCC GATTTCAACC TCAGAGGGAT GGCAACAGTG GCACGATACG
CCGGAACTGG CTGATCACGC AGACTTCATC GCGGCGCATG TCTTGCCATT CAGGGAGTTC
GTTCCAGTCA CCCAGGCAGG CTCTGCAGTT CTCGCACGGG CGAACGAATT GAGGCTGATG
TTTCCCGAAA AACCGCTGAT ACTTTCCGAG ATTGGCTGGC CAGACAAAGG CAACTTCAGA
AGACGCACCA CCGCCTACGT CGCCGAACAG TCAATTTACC TGCGCAGCCA GCTCGCGCTG
TTGAACCAGA GTGGCCTCGA CTACTTTGTC AGGGAGGCAT TTGATCAACA ATGGAAAACT
GAGGAAGGGT TGCCGGGGCC TCACTGGGGC CTGTTCGATG CCCAGCGAAA GATAAAGTTA
CCACTGCAAG GCCCAGTGAA AATACGGGCC AGCTGGCGAT CAGAAGTTCC GAGATTGGTC
GCCGATTGGC AGCCCGACAA CTGGCGAACA ACCGTATTGA TTTTTGCTGC GTTGTACACA
TTATTGGTAG GCGTTGGCAT AAGTTACGCA CAGCCCTTAT CGATGTGGGT GGCTTTGCCC
ATCGCCTTGG TGTGGGTGAC CAGCTTACTG ATCGGCACGG GGATACAGGG TTACGAGTTC
CTCGAATCAT GCTGGGGACC GGAGAAACCG CGATCTTTTC CTCCGTTAAG AGCTTACCCG
GGGCCGTTAC CCAAAGTGTC CATACACGTA CCGTGCTACA ACGAACCTCC CGACATGGTG
AAGCTGACGC TCGACGCATT ACAACGCCTG GACTATCCGA ACTTTGAGGT TCTGATCATC
GACAACAACA CTCAAGACCC GGAAGTCTGG GAGCCCATTG AGCAGTACTG CAGGCAACTG
GGACCTCGCT TCCGGCTCTT TCATGTCAAT CCACTTAGCG GGTTCAAGTC GGGCGCACTG
AACTACCTGC TGGACTACAC CGCCAAGGAT GCCGAAATAG TAGCGGCGAT CGATGCTGAT
TATTGCGTGC ACCGGCATTG GCTCAAGCAT ATGGCCCCCT ATTTTGCGTG CCCGGATATA
GCGGTTATCC AAGTACCGCA AGACTACCGT GATGGCGACG ACAGCCTGTT CAAACGTTGC
TGCCAGGCCG AGTATCGCGT TTTTTTCAAT ATTGGCATGG TCATCCGCAA CGACCACGAC
GCAATCATTC AGCACGGCAC CATGACCCTG ATTCGCAATT CGGTGTTGCA GCGACTGCGC
TGGGCAGAAT GGAGCATCTG CGAAGATGCC GAGCTCGGAC TGCGGATACT GGAGAACGGT
TTTTCCACCG GCTATGTCGC CATCAGCTAT GGCAAGGGAC TGATCCCGGA TACATTCATG
GACTTCAAGA AACAACGGTA TCGCTGGGCT TACGGTGTCA TCCAGATACT CAAACGACAT
ACTGGAAGCC TGATCGCAGG TACGTGCGAG GCCTTGACGC CAATACAGCG CTATCACTTC
ATTGCCGGCT GGATGCCTTG GATTGCAGGG GGAATAAATT ACTTTCTGGC TATCGCTGTG
CTTCTCTGGT CAATGGCAAT GATCATTCAA CCCGACACAC TCGAACCTGT GCCGTGGATA
TTTTCATCCT CATTACTGTT GATGTTTGTT CTGGGCGTTT GCAAAGCGAT CAGCCTTTAT
CAACGATTGG CCAGCACCGA CATCAAAGAC GCCTTCGCAG CCATAATTGC GAGCATGGCG
CTGTACTCGG TTGTAGGCAA GGCCGTGCTT TCATCGGCAT TCACCTCAGG ATTACCGTTC
TTTCGCACTC CCAAGCAGAC CTCTGGCAGC GGGCTCGGCA AGGCCCTGCT GGACGTCCGG
GAAGATCTGT ACATGGCCGT GGTCTGGTGG GTCATGACGG TATCGCTGTG CTTCCGAAAA
GAAGCTATCG GTCCGGACCT TGGATTCTGG GTGGCGATAA TGTTCGCCCA GTCATTGCCT
TACGTAGCCG CCATGATCAT GGCAATACTG TCGGCTCTCG CAAACCGCCC TTCACGCTCC
ACAACCTGA
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| Protein sequence | MSIYRMEHSL DMNKKISDAP IWPVNSFKSV VTKVPDWPDS ISGLAYNPFR PGQSPYKHIY
PTREQIKEDL LLIRPLTRHV RTYSVEQTLA CIPEIAEELG MSVTLGIWIG WDEKRNDREL
IEGVKLANQY PSVRRLIIGN ETLLRNDVTV SQLIDYMQTA RQGVNVPIST SEGWQQWHDT
PELADHADFI AAHVLPFREF VPVTQAGSAV LARANELRLM FPEKPLILSE IGWPDKGNFR
RRTTAYVAEQ SIYLRSQLAL LNQSGLDYFV REAFDQQWKT EEGLPGPHWG LFDAQRKIKL
PLQGPVKIRA SWRSEVPRLV ADWQPDNWRT TVLIFAALYT LLVGVGISYA QPLSMWVALP
IALVWVTSLL IGTGIQGYEF LESCWGPEKP RSFPPLRAYP GPLPKVSIHV PCYNEPPDMV
KLTLDALQRL DYPNFEVLII DNNTQDPEVW EPIEQYCRQL GPRFRLFHVN PLSGFKSGAL
NYLLDYTAKD AEIVAAIDAD YCVHRHWLKH MAPYFACPDI AVIQVPQDYR DGDDSLFKRC
CQAEYRVFFN IGMVIRNDHD AIIQHGTMTL IRNSVLQRLR WAEWSICEDA ELGLRILENG
FSTGYVAISY GKGLIPDTFM DFKKQRYRWA YGVIQILKRH TGSLIAGTCE ALTPIQRYHF
IAGWMPWIAG GINYFLAIAV LLWSMAMIIQ PDTLEPVPWI FSSSLLLMFV LGVCKAISLY
QRLASTDIKD AFAAIIASMA LYSVVGKAVL SSAFTSGLPF FRTPKQTSGS GLGKALLDVR
EDLYMAVVWW VMTVSLCFRK EAIGPDLGFW VAIMFAQSLP YVAAMIMAIL SALANRPSRS
TT
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