Gene PSPTO_1496 details

Gene Information

• Locus tag: PSPTO_1496
• ID: 1183133
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas syringae pv. tomato str. DC3000
• Kingdom: Bacteria
• Replicon accession: NC_004578
• Strand: +
• Start bp: 1651799
• End bp: 1652488
• Gene Length: 690 bp
• Protein Length: 229 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 637392869
• Product: CheW domain protein
• Protein accession: NP_791322
• Protein GI: 28868703
• COG category: [N] Cell motility; [T] Signal transduction mechanisms
• COG ID: [COG0835] Chemotaxis signal transduction protein

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACGGGCC TGTCCGGTTT TTCCAGCATT ACCCATGATC AAGCCCTGGA CATCGATGAT 
TGCTGGAACC GCATCGGCAT TCACGGTGAC CGCTCATGCC CGTTGCTGGA AGAGCATATC 
CATTGCCGCA ATTGTGCGGT TTATTCCGCG GCGGCCACAC GTTTGCTGGA CCGCTATTCA 
CTGGCTCAGG AGCATCACGA GCAGTTTCAG GGTTCGGTGT TGCAGCGCGA CATCAAGACC 
CGCTCGATTC TGGTGTTTCG CCTCGGTGAA GAGTGGCTGG GGCTGGTTTC CAGTTGCCTG 
TCAGAGGTCG CTCCGTACCA GACGATTCAT TCGCTGCCGC ATCAGCGATC ACGTGCGATG 
CTGGGCGTGG CCAACGTGCG CGGGGCTCTG GTCGCGTGCA TTTCGCTGGT CGAGCTGCTC 
GGGCTGGACA GCAACCCGGT GATTGCCCAG TCGACACGTG TGGTGCCGCG CATGTTGATT 
ATCGCGGTCG GAGGCGGGCC GGTCGTGGTG CCCGTGGACG AGGTCGACGG CATTCATGCC 
ATTGACGAGC GTGAGCTGGA AGCCGCTTCT GCGTCCGGCA CGCATGCCAA TGCCCGCTTT 
ACCCGTGGCG TGCTGCAATG GAAAGACCGC AGCCTGCGTT GGCTGGATGA AGAACAGTTG 
TTGTCGGCGG TGCATCGGAG CCTTACATGA 

 

Protein sequence

MTGLSGFSSI THDQALDIDD CWNRIGIHGD RSCPLLEEHI HCRNCAVYSA AATRLLDRYS 
LAQEHHEQFQ GSVLQRDIKT RSILVFRLGE EWLGLVSSCL SEVAPYQTIH SLPHQRSRAM 
LGVANVRGAL VACISLVELL GLDSNPVIAQ STRVVPRMLI IAVGGGPVVV PVDEVDGIHA 
IDERELEAAS ASGTHANARF TRGVLQWKDR SLRWLDEEQL LSAVHRSLT