| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1400 |
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| Symbol | hrcN |
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| ID | 1183036 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 1537029 |
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| End bp | 1538378 |
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| Gene Length | 1350 bp |
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| Protein Length | 449 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637392772 |
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| Product | type III secretion cytoplasmic ATPase HrcN |
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| Protein accession | NP_791227 |
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| Protein GI | 28868608 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1157] Flagellar biosynthesis/type III secretory pathway ATPase |
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| TIGRFAM ID | [TIGR01026] ATPase FliI/YscN family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAACGCCG CACTGAACCA GTGGAAAGAC ACCCACGCAG CGCGCTTGAG CCAGTACTCC
GCCGTGCGCG TCAGTGGCCG GGTGAGCGCG GTGCGCGGGA TTTTGCTGGA GTGCAAGATA
CCGGCAGCCA AGGTCGGCGA TCTGTGCGAA GTGAGCAAAG CCGACGGCAG TTTTCTGCTG
GCTGAAATCG TTGGCTTCAC CCAGGAATGC ACGCTGCTCA GCGCCCTCGG TGCGCCGGAC
GGCATTCAGG TCGGTGCGCC GATCCGCCCG CTCGGCATCG CCCATCGAAT AGGCGTGGAC
GACACGTTGC TGGGCTGCGT GCTGGACGGT TTCGGACGGC CGCTGCTCGG TGATTGCCTG
GGGGCCTTTG CCGGGCCGGA TGATCGCCGC GACACGCTGC CGGTGATTGC CGACGCCTTG
CCGCCAACCC AGCGGCCGCG CATCACCCGG TCTTTGCCTA CCGGCATACG GGCCATCGAC
AGCGCCATTC TGCTCGGTGA AGGCCAGCGG GTCGGGCTGT TCGCCGGTGC CGGTTGCGGC
AAGACCACGC TGATGGCCGA ACTGGCCCGC AACATGGACT GCGACGTCAT CGTCTTCGGG
CTGATCGGTG AGCGGGGCCG CGAACTGCGC GAGTTTCTCG ACCATGAACT GGACGAAACC
CTGCGCGCTC GCTCGGTACT GGTTTGTGCC ACGTCCGATC GATCCAGTAT GGAACGCGCC
CGCGCCGCTT TCACGGCAAC CGCCATCGCC GAAGCCTTTC GCGCGCGGGG CCAGAAGGTC
TTGCTGCTGC TCGACTCCCT GACCCGATTT GCCCGTGCGC AACGGGAAAT CGGCATTGCA
TCGGGCGAAC CGCTGGGCCG CGGCGGTCTG CCACCCTCGG TGTACACCCT GCTGCCACGG
CTGGTGGAAC GTGCCGGGAT GAGCGAAAAC GGTTCGATCA CCGCGCTCTA CACCGTACTG
ATCGAGCAGG ACTCGATGAA CGACCCCGTG GCCGATGAAG TACGCTCGTT GCTCGACGGC
CATATCGTGC TGTCGCGCAA GCTGGCCGAG CGCGGCCACT ACCCCGCTAT CGACGTGTCC
GCCAGCATCA GCCGGATCCT CAGCAACGTC ACCGGTCGCG ATCACCAGCG CGCCAACAAT
CGTCTGCGCC AGTTGCTGGC GGCCTACAAG CAAGTGGAAA TGCTCTTGCG CCTGGGTGAA
TACCAGGCCG GCGCCGACCC GGTGACCGAT TGCGCGGTGC AACTGAACGA CGCGATCAAT
GCGTTTCTGC GCCAGGACCT GCGTGAGCCT GTGCCCCTGC AGGAAACCCT CGACGGGTTG
CTGCGCATCA CCTCGCAACT GCCGGAGTAA
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| Protein sequence | MNAALNQWKD THAARLSQYS AVRVSGRVSA VRGILLECKI PAAKVGDLCE VSKADGSFLL
AEIVGFTQEC TLLSALGAPD GIQVGAPIRP LGIAHRIGVD DTLLGCVLDG FGRPLLGDCL
GAFAGPDDRR DTLPVIADAL PPTQRPRITR SLPTGIRAID SAILLGEGQR VGLFAGAGCG
KTTLMAELAR NMDCDVIVFG LIGERGRELR EFLDHELDET LRARSVLVCA TSDRSSMERA
RAAFTATAIA EAFRARGQKV LLLLDSLTRF ARAQREIGIA SGEPLGRGGL PPSVYTLLPR
LVERAGMSEN GSITALYTVL IEQDSMNDPV ADEVRSLLDG HIVLSRKLAE RGHYPAIDVS
ASISRILSNV TGRDHQRANN RLRQLLAAYK QVEMLLRLGE YQAGADPVTD CAVQLNDAIN
AFLRQDLREP VPLQETLDGL LRITSQLPE
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