| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1395 |
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| Symbol | hrcR |
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| ID | 1183031 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 1534238 |
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| End bp | 1534840 |
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| Gene Length | 603 bp |
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| Protein Length | 200 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637392767 |
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| Product | type III secretion protein HrcR |
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| Protein accession | NP_791222 |
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| Protein GI | 162533077 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4790] Type III secretory pathway, component EscR |
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| TIGRFAM ID | [TIGR01102] type III secretion apparatus protein, YscR/HrcR family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCGCTGA TCCCTTTTTT GCTGATCGTC TGCACCGCGT TTCTCAAGAT TGCCATGACC
CTGTTGATCA CCCGCAATGC CATCGGCGTG CAGCAGGTGC CACCAAACAT GGCGCTGTAC
GGCATCGCTC TGGCGGCGAC CATGTTCGTC ATGGCCCCGG TGGCCCATGA AATGCAGCAG
CGTGTGCATG ACCACCCACT GGAGCTGGGC AATACCGAAA AACTGCAAGC CAGCGCCAGA
ACCGTCATCG AACCGCTGCA ACGGTTCATG ACCCGTAATA CCGACCCGGA TGTCGTCGCT
CACCTGCTCG ACAACACCCA GCGCATGTGG CCCAAGGAAA TGGCAGACCA GGCGAGCAAG
AACGACTTGC TGCTGGCGAT CCCGGCGTTC GTCCTGTCGG AGCTGCAAGC CGGCTTCGAG
ATCGGTTTTC TGATCTACAT CCCGTTCATC GTTATCGACC TGATTGTCTC CAACCTGCTG
CTGGCGCTGG GCATGCAGAT GGTCTCGCCC ATGACGCTGT CGCTGCCACT CAAGTTGCTG
CTGTTTGTCA TGGTGTCGGG CTGGTCGCGT CTGCTCGACA GCCTCTTCTA TTCGTATATG
TGA
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| Protein sequence | MSLIPFLLIV CTAFLKIAMT LLITRNAIGV QQVPPNMALY GIALAATMFV MAPVAHEMQQ
RVHDHPLELG NTEKLQASAR TVIEPLQRFM TRNTDPDVVA HLLDNTQRMW PKEMADQASK
NDLLLAIPAF VLSELQAGFE IGFLIYIPFI VIDLIVSNLL LALGMQMVSP MTLSLPLKLL
LFVMVSGWSR LLDSLFYSYM
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