| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1373 |
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| Symbol | hrpW1 |
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| ID | 1183009 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 1509390 |
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| End bp | 1510664 |
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| Gene Length | 1275 bp |
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| Protein Length | 424 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637392745 |
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| Product | type III helper protein HrpW1 |
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| Protein accession | NP_791200 |
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| Protein GI | 28868581 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000104079 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCATCG GCATCACACC CCGGCCGCAA CAGACCACCA CGCCACTCGA TTTTTCGGCG
CTAAGCGGCA AGAGTCCTCA ACCAAACACG TTCGGCGAGC AGAACACTCA GCAAGCGATC
GACCCGAGTG CACTGTTGTT CGGCAGCGAC ACACAGAAAG ACGTCAACTT CGGCACGCCC
GACAGCACCG TCCAGAATCC GCAGGACGCC AGCAAGCCCA ACGACAGCCA GTCCAACATC
GCTAAATTGA TCAGTGCATT GATCATGTCG TTGCTGCAGA TGCTCACCAA CTCCAATAAA
AAGCAGGACA CCAATCAGGA ACAGCCTGAT AGCCAGGCTC CTTTCCAGAA CAACGGCGGG
CTCGGTACAC CGTCGGCCGA TAGCGGGGGC GGCGGTACAC CGGATGCGAC AGGTGGCGGC
GGCGGTGATA CGCCAAGCGC AACAGGCGGT GGCGGCGGTG ATACTCCGAC CGCAACAGGC
GGTGGCGGCA GCGGTGGCGG CGGCACACCC ACTGCAACAG GTGGCGGCAG CGGTGGCACA
CCCACTGCAA CAGGCGGTGG CGAGGGTGGC GTAACACCGC AAATCACTCC GCAGTTGGCC
AACCCTAACC GTACCTCAGG TACTGGCTCG GTGTCGGACA CCGCAGGTTC TACCGAGCAA
GCCGGCAAGA TCAATGTGGT GAAAGACACC ATCAAGGTCG GCGCTGGCGA AGTCTTTGAC
GGCCACGGCG CAACCTTCAC TGCCGACAAA TCTATGGGTA ACGGAGACCA GGGCGAAAAT
CAGAAGCCCA TGTTCGAGCT GGCTGAAGGC GCTACGTTGA AGAATGTGAA CCTGGGTGAG
AACGAGGTCG ATGGCATCCA CGTGAAAGCC AAAAACGCTC AGGAAGTCAC CATTGACAAC
GTGCATGCCC AGAACGTCGG TGAAGACCTG ATTACGGTCA AAGGCGAGGG AGGCGCAGCG
GTCACTAATC TGAACATCAA GAACAGCAGT GCCAAAGGTG CAGACGACAA GGTTGTCCAG
CTCAACGCCA ACACTCACTT GAAAATCGAC AACTTCAAGG CCGACGATTT CGGCACGATG
GTTCGCACCA ACGGTGGCAA GCAGTTTGAT GACATGAGCA TCGAGCTGAA CGGCATCGAA
GCTAACCACG GCAAGTTCGC CCTGGTGAAA AGCGACAGTG ACGATCTGAA GCTGGCAACG
GGCAACATCG CCATGACCGA CGTCAAACAC GCCTACGATA AAACCCAGGC ATCGACCCAA
CACACCGAGC TTTGA
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| Protein sequence | MSIGITPRPQ QTTTPLDFSA LSGKSPQPNT FGEQNTQQAI DPSALLFGSD TQKDVNFGTP
DSTVQNPQDA SKPNDSQSNI AKLISALIMS LLQMLTNSNK KQDTNQEQPD SQAPFQNNGG
LGTPSADSGG GGTPDATGGG GGDTPSATGG GGGDTPTATG GGGSGGGGTP TATGGGSGGT
PTATGGGEGG VTPQITPQLA NPNRTSGTGS VSDTAGSTEQ AGKINVVKDT IKVGAGEVFD
GHGATFTADK SMGNGDQGEN QKPMFELAEG ATLKNVNLGE NEVDGIHVKA KNAQEVTIDN
VHAQNVGEDL ITVKGEGGAA VTNLNIKNSS AKGADDKVVQ LNANTHLKID NFKADDFGTM
VRTNGGKQFD DMSIELNGIE ANHGKFALVK SDSDDLKLAT GNIAMTDVKH AYDKTQASTQ
HTEL
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