Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_1353 |
Symbol | |
ID | 1182989 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 1490846 |
End bp | 1491241 |
Gene Length | 396 bp |
Protein Length | 131 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637392725 |
Product | hypothetical protein |
Protein accession | NP_791180 |
Protein GI | 28868561 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGACATCA ACCTTCCCCA CGTGGTCGCC GAAGTGAGCC ACGCCTTCAC CGACTACGAA CGCGCCCTGC TGGCCAATGA ATTGACCACA CTGGATGCGT ATTTCTGGAA CGCCGAACAC ACCGTTCGCT ACGGCGTCGC GGAAAACCTG CACGGTGCCG ATACCATTGC GCGCTATCGA CGCCAATGCC AACCGGTCGG CCCCGGCCGT ACGCTGTTGC GCACGGTGAT CAGCACCTTC GGTGAGGACT TCGCCACGGT GAGCACCGAG TTTCACGATG GCGTCACTCA ACGCCTGGGA CGGCAAATGC AAACCTGGGT TCGCCTGGAG GGCGGCTGGA AAGTCGTTGC TGCACATGTC AGCATTGACC TCAGCAGTCT GGAGCCACGC CCTTGA
|
Protein sequence | MDINLPHVVA EVSHAFTDYE RALLANELTT LDAYFWNAEH TVRYGVAENL HGADTIARYR RQCQPVGPGR TLLRTVISTF GEDFATVSTE FHDGVTQRLG RQMQTWVRLE GGWKVVAAHV SIDLSSLEPR P
|
| |