| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1349 |
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| Symbol | |
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| ID | 1182985 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 1482921 |
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| End bp | 1488389 |
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| Gene Length | 5469 bp |
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| Protein Length | 1822 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637392721 |
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| Product | hypothetical protein |
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| Protein accession | NP_791176 |
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| Protein GI | 28868557 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1112] Superfamily I DNA and RNA helicases and helicase subunits |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACCCAA TGAATCAGTC AACCCATCAA ATAGTCACGT TCGAACACTT GCTGCACACC
CACGACGGCG CGGCCGTGCC GATAGACGAC GTGCTGTTTT TGATGCTGCC ACTGCTGCGG
GAAGTCGCGC GGTTGCACGA GTCGGGCCGC GTAGCTCAAC TGAGTTACGC CGACGTCATC
CAGGGGCCGG AGCGCAGCCT GCAACTGCGT GATCCGCAAG GCGCACTGCC ACGTCTGGCG
CTGGAAGCGA TCAGGCAGGT TCAGCCCAAC CCCGAGTCGG CGCTGAATAT CGTCGGCAAA
GTGCGCCTGA CCCGCGATTC GGAAGACGGT GTAGCCGTGA CCGATCTGCA AGTGCAGGAA
GACCTGCACC AGCCCATCGA CCATCCGGTG TTCCTCCTCG GCCTGCAGAG CTGGGAACAT
CGTCTGGGCC ATCACGATGA AATCACCGAC ATCTTCCAGC TCGGGCAATT GCTGGCGTGC
CTGGCCTGCG GGCTGGACTT TGCCGACCTC GATGACCTCA AGACCTTCGC CCGGCACCGG
CGAAACCTGT TCCAGCTCAA CAGCCGGCTC AACCCGGTGC TGGCCAATCT CATCGTCGAG
ATGACCGAAC TCAACAGGCA CGAGCGTGCC ACCGATGTCA GCTCGCTGGC GCGCCGCCTG
GAAACCTGGC GTGAGCAGCC TGCCAGCCTG GACGTCGAGC GGGTTCTGGC AGAGGCCCAA
GGCCCGGCTT CGCGGCGTAC CGTGGTGCTG GAGCACTTGC GCAACCGCCT GTTCGACCTG
TCGAGGCGCA ACCGCCTGCT GCACTTTCGT CCGACCCAGG CCAACATCAA CCTGACCGTG
GCCAGCGTGC CGCTGGTCAT GCGCATTGAA AGCATTCGCC CGGAATCGCT GTGCACCTGG
CAAGCCACGT TCGGGGGGTT CTCCGAGCAG GTCCTGAGCG GGAAGCCGGT GGGCCTGCAA
CAATGGCTGC GCTTTGAAGA TCAGGCCTGG CTGCAGACCT CTCTGGAGCG GATCATTCAG
GAAACCCGCC GCGATCGCGC CGAGTTTGGT TTCAGCAACC TGCGCCTGGT CGTGGCGTTC
ATGCGCTGGC ACAACCTCAA GGACACGCCG GACGAGCGTA TCGTGACGCC GCTGCTGTGG
CTGCCGGTAG CGTTGAGCCG TAAGAAAGGC GTGCGCGACC AGTTTGTCTT GCAGTGCGAT
GAAACCGAGG CCGAATTCAA TCCGGTCCTG CGCCACCTCC TTCGCCAGTT GTACGACATC
CAACTGCCGG AAACCGTAGA CCTGCAAAGC ACGTCGCTGG AACAGATTCA TGCCGACATT
GCCCGGCAGA TAAAGCTCTC CGAACCGGGC GTCGAACTGC GCCTGCAAAG CAAACCGAAA
ATCGAGCTGA TCCATCAGAA AGCCGTCCAG CACCTGCACC ATTTCCAGCG CCGCCGCGCT
GGTCAACGCT CGGCAATGGC CTCGGTAAAA CCGGACTTCA GCTACGACCG CGATGACTAT
CGCCCGCTGG GCCTGCAATT GTTCCGGCAA AAAGTCCTGC CCAGCGAATT GCCCTTGCGC
AATGCGGTGG ACACGCCACC CGCCGTGCGC ACGCAGCATC CGCAGATGGT TGCCGGCAGC
ACCGAGAACA GCACGTTCTC CATGCCGGCG GATGAAGGGC ACCGCTACGC CTGGGACATC
GACCTGACGC AAGTGACGCT GGCCAATTTC AACTACCGGA AAATGTCGCT GGTGCGCGAC
TACGCGCAAC TGATCGAGGA ACCTGCCCAG AATGAGGCCT TCGACCGGAT GTTCTCGATC
GAGCCGCGAG ACATCGAAGT GCAGGCGCCG GACCCGATTG CCCTGCCGGA GCAGTGGAAT
GTCGTGGCCG GTGATGCCAC ACAGAATGCC GCCGTCAGCC TGGCCCGCAC CGGACGCAAC
TTCATCATTC AAGGCCCGCC CGGCACCGGC AAGTCGCAGA CCATCACCAA CCTGATTGCC
GACTACGCCG GTCGCGGTTT GCGCGTGCTG TTCGTCTGTG AAAAACGCGC GGCGCTGGAC
GTGGTGTTTC ATCGCCTGCA ACAGAGCGGG CTGGGCGAGC TGTGCTGCCT GATTCATGAC
TCACAAACGG ACAAAAAAGC CTTTGTCGGC AACCTGCGGG AATGCTATGA GCGCTGGATT
GCTGCCGACG CCCAGTCGCA GACCCTGCAG GCGCAACGCA CTGCCACGCT GGCGGCCATG
AGCGAGCAAC TGGGACTGAT CGAACGATTC GAACACAGCA TGGCCAGCGT GCCTCAGACG
CTCGCCTGCT CGGTTCGCGA ACTGGTGCGT CATCTGATCG AGCTGCCTGC CGCTGCCGCC
GCGCTGCCGC CCGAAGCGCT GGAGCGCCTG CCTGAATGGC ACCACTGGCA GCAGCAACGC
GAGCTGACCC AGCGTGTGTA CCTGACGATG CGCGAACGCT TCGGCCTGGA CAGCTTCGCC
CGCCATCCTT TCAGTCATCT GGCCTCACGC CTGGTGACCC ACGAACACGC CTACGGCCAG
CTCAAGAGCG CTGTGGACGA AGCCAGCGGG CTCATGCAGC GTATCGAGCC GGTGCTGGAG
TCGTCTGCCA GTCTGTTGGC CAACGACACC CGGCTGACCG ATGCGCAGGT TTTCAGTGAG
GCCGCCGAGC AACTGACCAA TGCCAACCTG ACCTCTCACC TCGACCTGCT GGAGCCGAGC
TCACCCGCTT CCCGGACGCT GCAGACCGAG CAAGCCACCT TACAGGCGCT GACAGTGCAG
CAACACAGCG CCAGCGAGGC CACTCGCCAC TGGCGCGACA AACCTGGCGT TCAGGACACC
CTAGCCGCGC AGGCATTGGT GCAGGGGCTG GAAGGCTCGT TCATGCGCTG GCTGCAACCG
TCCTGGTGGC GGCTGCGCGG CGAATTGAAG CGACGTTACG ATTTCAGTCA GCATGCAGTG
GCGCCCAGCT ATCGCAGCAT TCTCGACAAC CTGGCTCGTG AACATCAGGC CAACGCACAG
TTGCACGCTG AACAGCAGCG GCTGCAAGAG CGTTACAGCA TCCAGAACAT CGACGCTTTT
GTGCAGGGTC AACAGGCCCT GCTGCAGCAA CTGGCCACCT CGCCACTGAT GCGTCAGTGG
GTCGAGCGTT TGCGCAGTGA TCCCGAGGCT GTGTCCGGGC TTGCTCAGGA GGCCAGCCTG
CGTCAGCCGT TGGCGCGGCT GGCCGAAATA GTGGCCGGGT CGTTCGTGTT CGAGCCGTCA
CTGACGCTGG CTGAAGTGGC CGAATACCTG CGCGACCTGC ACGAGGAACT CAGCGAGCTG
CCCGATACCC TGCCGCTTCT GAACGAACTG CATCAGGCTG ACCCGGCCTG CCTGCGTGCC
CTCCAGACAC AGGCACTGGC GCAGCGCCCG CTGGACGCAT TGATAGCCCA GGAAAATCTG
ACCCGGTTTT ATCGCGCCAA CCCGCAAGTG GCGCGCTTTG ACGGCAAGAC GCTGAGCCTG
GCCACACACA AGGTCAGCCA GGCCGAAAGC AGCCTGCTCA AGCACAACGC CCATGTGCTC
AGCGCAACCT TGCACCAACG CTTTCTGGAA CATGTCAGGC AATCGGCACT GTCGGTCGCC
CAACTGGACC CACAGGCAAG AGAGTTCAAG AAGACCTACG CCAAAGGACG TCGGGAACTG
GAGCACGAAT TGGGTAAGAC CATGCGTTAC CGCTCCATTC GCGAACTCGC CAGCGGTGAC
AGCGGCCGGG TGATCAACGA CCTGAAACCC GTCTGGCTGA TGAGCCCGTT GTCAGTGTCC
GACACCCTGC CACTGACACC GGACCTGTTC GATGTGGTGA TTTTCGACGA AGCCAGTCAA
ATCCCCAGCG AAGAAGCGGT GCCGGCGCTG AGCCGTGCGC AGCAGGTGAT TGTGGTCGGT
GACGAAATGC AGCTGCCGCC GACCAATTTC TTCTCCAGCG CCGGCGACCA ACAAGACAAC
GAACTGATCG CCATGGAAGA CGGCGAGCAG ATTGCCATCA ATCTTGATGC CGACAGCCTG
TTGAGTCAGG CGGCACGCAA TCTTCCGGCC ACATTGCTGG CGTGGCACTA CCGCAGCCGC
CACGAGGCGC TGATCAGCTT TTCCAATGCG GCGTTTTATG AGGGACGGCT GATCACCATT
CCGGACCGTC GTATCGAACA CCCGGTGCCA GTCAGCACGC CGCTGGACTC CAGCGAGGAT
CAGGCCGTCA TTCAGGGCGC CGATACGTTG CTCGACAGCC CGATCAGCTT CCTGAAAATC
GAGGACGGCG TGTACATCAG CCGGGGCAAC GTTGCCGAGG CGCGCTACAT CGCCGGCCTG
GTACGCGAAC TGTTGCGCCG CGAAACCGGT TTGAGCCTGG GTATCGTGGC GTTTTCCGAG
GCCCAGCAAG GCGAAATCGA GCAGGCGCTG GAGAACCTGG CCGCCAGCGA CGCAGACTTC
GCCACCCGCC TGGAACGTGA ATACGTGCGT GAGGATGCCG GGCAGTTCAA TGGCCTGTTC
GTTAAAAACC TGGAGAACGT TCAGGGTGAC GAGCGCGACG TGATCATCCT GAGCATCTGC
TACGCGCCAG GGCCGAACGG CAAGATGCTG ATGAATTTCG GCCCGATCAA CCAGCGCGGC
GGGGAAAAGC GTCTGAACGT GATCTTCAGC CGCGCGCGTA AACGCATGGC GATTATCTCC
AGCATCGAGG CCGATGCCAT CACCAACACC CACAACGATG GCGCCGCAGC CCTGCGCGCG
TTCCTGCAGT TCGCCCGCGC CAGTGCCGCA GGCGACGCGC CACGCTCGCA AGGGATACTC
GCCAACCTCA ACCCCGGTGC CAAACAGTCC TTCGCCATTA CCTTGCCCAA GGACAGCCTG
CGCACCGCTC TGGCCGCAGC CTTGCGCAAA CGCGGTCACG AAGTGCAGGA ATATGTCGGG
CGCTCGCAAT TTCGCTGTGA CCTGGCCATT GCCGAGGCGG ACGGCGAGCA TTTCAGCCTG
GGCATCCTGC TGGACGGCGA CGCGTCAGCC ACTGCCAACG TTCGTGAGCG CTACATCTTC
CGGCCTACCG TACTGCGCAG TTTCGGCTGG AAGATCATCG ATGTGCTCAG CCACGACTGG
CTCAATGACA GCGAAGAGGT GCTGAACCGC ATTGAAGCCC TTCTGCAACG AGGTGAAGAC
ACTCCTGAAC TGCCGCCGGC CAATGACGAA AACGTCGAAG TCGAGCAACA GGACTCTTCG
CCGCTGATTG AGGACTCAGT GGTTGCAGGC AGCACTCAAC TGCGTGAATT CACGTTCGGC
GAAGGCAACT CGAACAAGTT CTGGCGCATC GGCGCGGCCG AATCGGACGT GATAGTCAAC
TTCGGCCGTA TCGGCACACA AGGCCAGACC ATGACCAAAA CAATGGACAG TCCGGAGCAG
GCCGCGCGGG AAGTTGAGAA GCTGATTGCC GAAAAACTGC GCAAGGGTTA TCAGGAACAG
GGCGCCTGA
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| Protein sequence | MDPMNQSTHQ IVTFEHLLHT HDGAAVPIDD VLFLMLPLLR EVARLHESGR VAQLSYADVI
QGPERSLQLR DPQGALPRLA LEAIRQVQPN PESALNIVGK VRLTRDSEDG VAVTDLQVQE
DLHQPIDHPV FLLGLQSWEH RLGHHDEITD IFQLGQLLAC LACGLDFADL DDLKTFARHR
RNLFQLNSRL NPVLANLIVE MTELNRHERA TDVSSLARRL ETWREQPASL DVERVLAEAQ
GPASRRTVVL EHLRNRLFDL SRRNRLLHFR PTQANINLTV ASVPLVMRIE SIRPESLCTW
QATFGGFSEQ VLSGKPVGLQ QWLRFEDQAW LQTSLERIIQ ETRRDRAEFG FSNLRLVVAF
MRWHNLKDTP DERIVTPLLW LPVALSRKKG VRDQFVLQCD ETEAEFNPVL RHLLRQLYDI
QLPETVDLQS TSLEQIHADI ARQIKLSEPG VELRLQSKPK IELIHQKAVQ HLHHFQRRRA
GQRSAMASVK PDFSYDRDDY RPLGLQLFRQ KVLPSELPLR NAVDTPPAVR TQHPQMVAGS
TENSTFSMPA DEGHRYAWDI DLTQVTLANF NYRKMSLVRD YAQLIEEPAQ NEAFDRMFSI
EPRDIEVQAP DPIALPEQWN VVAGDATQNA AVSLARTGRN FIIQGPPGTG KSQTITNLIA
DYAGRGLRVL FVCEKRAALD VVFHRLQQSG LGELCCLIHD SQTDKKAFVG NLRECYERWI
AADAQSQTLQ AQRTATLAAM SEQLGLIERF EHSMASVPQT LACSVRELVR HLIELPAAAA
ALPPEALERL PEWHHWQQQR ELTQRVYLTM RERFGLDSFA RHPFSHLASR LVTHEHAYGQ
LKSAVDEASG LMQRIEPVLE SSASLLANDT RLTDAQVFSE AAEQLTNANL TSHLDLLEPS
SPASRTLQTE QATLQALTVQ QHSASEATRH WRDKPGVQDT LAAQALVQGL EGSFMRWLQP
SWWRLRGELK RRYDFSQHAV APSYRSILDN LAREHQANAQ LHAEQQRLQE RYSIQNIDAF
VQGQQALLQQ LATSPLMRQW VERLRSDPEA VSGLAQEASL RQPLARLAEI VAGSFVFEPS
LTLAEVAEYL RDLHEELSEL PDTLPLLNEL HQADPACLRA LQTQALAQRP LDALIAQENL
TRFYRANPQV ARFDGKTLSL ATHKVSQAES SLLKHNAHVL SATLHQRFLE HVRQSALSVA
QLDPQAREFK KTYAKGRREL EHELGKTMRY RSIRELASGD SGRVINDLKP VWLMSPLSVS
DTLPLTPDLF DVVIFDEASQ IPSEEAVPAL SRAQQVIVVG DEMQLPPTNF FSSAGDQQDN
ELIAMEDGEQ IAINLDADSL LSQAARNLPA TLLAWHYRSR HEALISFSNA AFYEGRLITI
PDRRIEHPVP VSTPLDSSED QAVIQGADTL LDSPISFLKI EDGVYISRGN VAEARYIAGL
VRELLRRETG LSLGIVAFSE AQQGEIEQAL ENLAASDADF ATRLEREYVR EDAGQFNGLF
VKNLENVQGD ERDVIILSIC YAPGPNGKML MNFGPINQRG GEKRLNVIFS RARKRMAIIS
SIEADAITNT HNDGAAALRA FLQFARASAA GDAPRSQGIL ANLNPGAKQS FAITLPKDSL
RTALAAALRK RGHEVQEYVG RSQFRCDLAI AEADGEHFSL GILLDGDASA TANVRERYIF
RPTVLRSFGW KIIDVLSHDW LNDSEEVLNR IEALLQRGED TPELPPANDE NVEVEQQDSS
PLIEDSVVAG STQLREFTFG EGNSNKFWRI GAAESDVIVN FGRIGTQGQT MTKTMDSPEQ
AAREVEKLIA EKLRKGYQEQ GA
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