| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1338 |
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| Symbol | sodC |
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| ID | 1182974 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 1468578 |
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| End bp | 1469096 |
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| Gene Length | 519 bp |
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| Protein Length | 172 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637392710 |
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| Product | superoxide dismutase, Cu-Zn |
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| Protein accession | NP_791165 |
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| Protein GI | 28868546 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2032] Cu/Zn superoxide dismutase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAACCTC ATCTTTTGCT TGGCCTTCTT GGCGCCTTTT CCCTCAGCGT TCAGGCAGCA
TCGCTGGACG TTCCGATCAA TCTGGTCAGC GCTGACGGCG CGCCCAAACT GATCGGCAGC
GTTACGGTGA GCGAAACAGA GTACGGCTTG CTGTTCACCC CAAAGCTGAA CGGTCTGCCT
GCGGGCATTC ACGGTTTCCA CGTGCATGAA AACGGTAGTT GCGAGGCAGG CACCAAGGAC
GGCGTGAAGG TTGCGGCACT GGCGGCCGGT GGTCACTTTG ACCCGGCCAA GACCGGCAAA
CACCTGGGGC CTTATGCGCG AGGTCACTTG GGCGACCTGC CCGCGTTGTA CGTCACGGCT
GACGGCACTG CCGACTATCC GGTATTGGCA CCGCGCCTGA AAAAACTGTC CGAAATCAAA
GGCCATGCAT TGATGGTTCA TGCCGGCGGC GATAACCACG CCGACATGCC TAAACCTTTG
GGCGGCGGCG GTGACCGTGC TGCTTGCGGT GTGATCTGA
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| Protein sequence | MKPHLLLGLL GAFSLSVQAA SLDVPINLVS ADGAPKLIGS VTVSETEYGL LFTPKLNGLP
AGIHGFHVHE NGSCEAGTKD GVKVAALAAG GHFDPAKTGK HLGPYARGHL GDLPALYVTA
DGTADYPVLA PRLKKLSEIK GHALMVHAGG DNHADMPKPL GGGGDRAACG VI
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