| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1307 |
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| Symbol | |
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| ID | 1182943 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 1436744 |
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| End bp | 1437421 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637392681 |
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| Product | DNA-binding heavy metal response regulator |
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| Protein accession | NP_791136 |
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| Protein GI | 28868517 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | [TIGR01387] heavy metal response regulator |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.150056 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCGCGTGC TGATCATCGA AGACGAAGAG AAAACCGCAG ACTACCTGCG CCGTGGCCTG
ACCGAACAGG GCTATACGGT GGACGTGGCC CGCGACGGCA TCGAAGGCCT GCATCTGGCC
TTGGAGAATG ACCACGCAAT CGTCATTCTC GACGTGATGC TGCCGGGGCT CGACGGTTTT
GGCGTGTTGC GTGCACTGCG CGCGCGCAAG CAAACGCCGG TGATCATGCT GACCGCTCGC
GAACAGGTCG ATGACCGCAT TCGCGGCCTG CGCGAAGGTG CCGACGATTA CCTCGGCAAA
CCGTTTTCGT TTCTGGAACT GGTCGCCCGC CTGCAGGCCC TGACCCGTCG CAGCGGGGGC
CACGAACCGC TGCAGATCAC CATCGCCGAC CTGTGGATCG ACCTGATCAG CCGCAAGGCA
ACCCGCGCCG GAGCACGACT GGACCTGACC GCCAAGGAGT TTTCGCTGCT CAGTGTGCTG
GCCCGGCGTC AGGGCGACAT CCTGTCCAAA ACGTCAATCG CCGAGATGGT CTGGGACATC
AACTTCGACA GCGACACCAA CGTGGTCGAA GTGGCGATCA AGCGCCTGCG CGCCAAGCTC
GACGGTCCTC ACGAGCACAA ACTGCTGCAC ACCATTCGCG GCATGGGCTA CGTGCTGGAG
AACCGCAGTG CGGGTTGA
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| Protein sequence | MRVLIIEDEE KTADYLRRGL TEQGYTVDVA RDGIEGLHLA LENDHAIVIL DVMLPGLDGF
GVLRALRARK QTPVIMLTAR EQVDDRIRGL REGADDYLGK PFSFLELVAR LQALTRRSGG
HEPLQITIAD LWIDLISRKA TRAGARLDLT AKEFSLLSVL ARRQGDILSK TSIAEMVWDI
NFDSDTNVVE VAIKRLRAKL DGPHEHKLLH TIRGMGYVLE NRSAG
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