Gene PSPTO_1304 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_1304 
Symbol 
ID1182940 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp1433113 
End bp1433583 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content54% 
IMG OID637392678 
Producthypothetical protein 
Protein accessionNP_791133 
Protein GI28868514 
COG category 
COG ID 
TIGRFAM ID[TIGR02284] conserved hypothetical protein 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.448465 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGATA TCAACAAAGA AACGATCTCT ATCCTGAATG ACCTGATCGA AACCAGCATC 
GACGGCAAAG AAGGGTTCCA GACCAGCGCA GAGAATGCGA AGACCCCATC GGTGAAAACG
TTTTTCACAC GCCGTTCTGC GGAAGTTGGC GCAGCAGTCA CTGAGCTGCA GCAGCATGTA
CAGCAACTGG GCGGCAAGCC AGAAGATTCG TCCAGCGTAT CCGCTGACCT GCACCAGGCA
TGGGTCAAGC TGAAAACCGC GTTCACCAGC AACGATGATC TGGCTGTACT GGAAGAAGCG
GAACGTGGCG AAGACGTTGC CAAGAAAGCC TATAGCAAGG CGCTTGAGAA GTCGCGTGAG
AAGGGTGTTT CCCCAGCCGT TATCGCGGTC ATCGAAAAGC AGTACCAAGG TGTTCTGAAA
AATCACGACG AAGTCAAAGC ACTGCGTAAC GCAGCCCGCG CCGCATCGTG A
 
Protein sequence
MTDINKETIS ILNDLIETSI DGKEGFQTSA ENAKTPSVKT FFTRRSAEVG AAVTELQQHV 
QQLGGKPEDS SSVSADLHQA WVKLKTAFTS NDDLAVLEEA ERGEDVAKKA YSKALEKSRE
KGVSPAVIAV IEKQYQGVLK NHDEVKALRN AARAAS