Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_1283 |
Symbol | |
ID | 1182919 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 1410144 |
End bp | 1410908 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637392657 |
Product | heme oxygenase, putative |
Protein accession | NP_791112 |
Protein GI | 28868493 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3230] Heme oxygenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTGGTGTG GGATATCTGA CACGGCGCGT GACCCAAAGC CCGCCGTCGA ACCTGTGCGG CAGGCTTTTT TACGCGTTTG GGCGTGGCTA TTCGTCTATT CAGTAAGCCC TTTTTTCAAC ATGCCTCCTA TTTCAGCAAG GAAGACTTCG ATGACGCTTG ATCAGAACCG ACCGACCCTG CGTTCGCAAC GACTGAATCA GATCACCCAC GCGCCGCATG AACAACTCGA CAAGGCAGTC AAAGCCTATG CGCCGTTCGA GACGCTGGCC GGTTATGCAC GTTTTGTGGT CGCCCAATAC CTGTTTCAGA GTGAACTGCA AGGCCTGTAC AACGAGCCTG CGTTGCAGGC AATCATCAGC GATCTGCCCG CACGCTGCCG TGCCGAACAG GCCAAAGCCG ACCTTGCCGA CCTGAACATG GACACCCCTT TACCGGTGGC TGGCGCAGTC AGAAGCCCCG GCACTGCGGA GGCGCTGGGC TGGCTGTTCG TCTCCGAAGG CTCCAAGCTG GGTGCCGCTT TTCTGATCAA GCGCGCCGAA GCACTGCAAC TGAGCGACCG TTTTGGCGCA CGGCATCTGG GCGAGCCCGC CGGGGGCCGG GCGGCGGGAT GGAAAGCCTT TGTGAATACG CTGAATGAAC TGCCTTTGAC CGCCGCACAG GAAGCGCAAC TGGATCTAGG CGCCATCGCA GCATTCGAGC GTTTCAACGT GCTGCTGCAG CACGCCTATG CCGATGCACC GGTCACGGAA ATGGTACAGG CATGA
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Protein sequence | MWCGISDTAR DPKPAVEPVR QAFLRVWAWL FVYSVSPFFN MPPISARKTS MTLDQNRPTL RSQRLNQITH APHEQLDKAV KAYAPFETLA GYARFVVAQY LFQSELQGLY NEPALQAIIS DLPARCRAEQ AKADLADLNM DTPLPVAGAV RSPGTAEALG WLFVSEGSKL GAAFLIKRAE ALQLSDRFGA RHLGEPAGGR AAGWKAFVNT LNELPLTAAQ EAQLDLGAIA AFERFNVLLQ HAYADAPVTE MVQA
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