| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1274 |
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| Symbol | |
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| ID | 1182910 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 1397612 |
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| End bp | 1397824 |
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| Gene Length | 213 bp |
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| Protein Length | 70 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 637392649 |
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| Product | cold shock domain family protein |
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| Protein accession | NP_791104 |
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| Protein GI | 28868485 |
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| COG category | [K] Transcription |
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| COG ID | [COG1278] Cold shock proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCTGAAC GTCAGAGCGG CACCGTCAAG TGGTTCAACG ACGAAAAAGG TTTTGGTTTT
ATCACTCCGG AGAGCGGTCC AGACCTGTTC GTGCACTTTC GCGCCATTCA AGGCAACGGC
TTCAAGAGCC TGAAAGAAGG CCAGAAAGTG ACCTTCATTG CTGTGCAGGG TCAGAAGGGT
CTGCAGGCTG ACGAAGTACA CGCCGAAGGC TAA
|
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| Protein sequence | MAERQSGTVK WFNDEKGFGF ITPESGPDLF VHFRAIQGNG FKSLKEGQKV TFIAVQGQKG
LQADEVHAEG
|
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