| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1243 |
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| Symbol | algD |
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| ID | 1182879 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 1366206 |
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| End bp | 1367522 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637392618 |
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| Product | GDP-mannose 6-dehydrogenase AlgD |
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| Protein accession | NP_791073 |
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| Protein GI | 28868454 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1004] Predicted UDP-glucose 6-dehydrogenase |
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| TIGRFAM ID | [TIGR03026] nucleotide sugar dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTATCA GCATATTTGG TTTGGGTTAT GTCGGTGCAG TCTGTGCCGG TTGCCTCTCT
GCCCGCGGCC ACGACGTAGT GGGTGTGGAC ATCTCCAGCA CCAAGATCGA CCTGATCAAC
AATGGCAAGT CGCCTATCGT TGAACCGGGC CTGGAAGAGC TGCTGCAAAA AGGTCTGGCC
ACCGGCAAAC TGCGCGGCAC TACCGACTTC GCCGAAGCCA TTCGCGCCAC TGACCTGTCG
ATGATCTGCG TGGGTACGCC AAGCAAGAAG AACGGCGACC TGGAACTGGA CTACATCGAA
TCAGTGTGCC GTGAAATCGG TTATGTCCTG CGTGACAAGA ACACTCGCCA CACTATCGTG
GTTCGCAGCA CCGTACTGCC TGGCACCGTC GCCAACGTGG TTATCCCGAT CCTGGAAGAC
TGCTCCGGCA AGAAAGCCGG CGTTGACTTC GGCGTTGCCG TAAACCCAGA GTTCCTGCGT
GAAAGTACCG CAATCAAAGA CTACGACCTG CCGCCAATGA CCGTGATCGG CGAGTTCGAC
AAGGCCTCGG GTGACGTTCT GCAATCGCTG TACGAAGAAC TTGACGCACC GATCATCCGC
AAGGACATCG CCGTTGCCGA AATGATCAAG TACACCTGCA ACGTGTGGCA CGCCACCAAA
GTGACCTTCG CCAACGAAAT CGGCAACATT GCCAAAGCAG TCGGCGTTGA TGGCCGTGAA
GTGATGGACG TGGTCTGCCA GGACAAGGCA TTGAACCTGT CCCAGTACTA CATGCGCCCA
GGCTTCGCCT TCGGCGGTTC GTGCCTGCCT AAAGACGTCC GCGCCCTGAC CTACCGCGCC
GGTAGCCTGG ATGTCGACGC ACCGCTGCTC AACTCGCTGA TGCGCAGCAA CACCTCGCAA
GTGCAGAACG CTTTCGACAT GGTTGCCAGC TACGACACCC GCAAGGTTGC ACTGCTGGGT
CTGAGCTTCA AGGCCGGCAC CGACGATCTG CGTGAAAGCC CGCTGGTAGA GCTGGCTGAA
ATGCTGATCG GCAAGGGCTT CGACCTGAGC ATTTTCGACA GCAACGTCGA ATACGCCCGT
GTTCACGGTG CCAACAAGGA CTACATCGAA TCGAAGATTC CGCACGTTTC CTCGCTGCTC
AATTCCGACT TCGATCAGGT CATCAACGAC TCCGACGTGA TCATCCTTGG CAACCGCGAC
GAGCGTTTCC GCTCCCTCGC CAACAAGACG CCTGAAGGCA AGCGCGTTAT CGACCTGGTG
GGCTTCATGA CCAATGCCAC CACCGAAGAC GGTCGTGCCG AAGGTATCTG CTGGTAA
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| Protein sequence | MRISIFGLGY VGAVCAGCLS ARGHDVVGVD ISSTKIDLIN NGKSPIVEPG LEELLQKGLA
TGKLRGTTDF AEAIRATDLS MICVGTPSKK NGDLELDYIE SVCREIGYVL RDKNTRHTIV
VRSTVLPGTV ANVVIPILED CSGKKAGVDF GVAVNPEFLR ESTAIKDYDL PPMTVIGEFD
KASGDVLQSL YEELDAPIIR KDIAVAEMIK YTCNVWHATK VTFANEIGNI AKAVGVDGRE
VMDVVCQDKA LNLSQYYMRP GFAFGGSCLP KDVRALTYRA GSLDVDAPLL NSLMRSNTSQ
VQNAFDMVAS YDTRKVALLG LSFKAGTDDL RESPLVELAE MLIGKGFDLS IFDSNVEYAR
VHGANKDYIE SKIPHVSSLL NSDFDQVIND SDVIILGNRD ERFRSLANKT PEGKRVIDLV
GFMTNATTED GRAEGICW
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