| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1240 |
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| Symbol | algK |
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| ID | 1182876 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 1361994 |
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| End bp | 1363406 |
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| Gene Length | 1413 bp |
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| Protein Length | 470 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637392615 |
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| Product | alginate biosynthesis protein AlgK |
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| Protein accession | NP_791070 |
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| Protein GI | 28868451 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.617938 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACAGCC CACTACGACG CCTATCGACC CCCACGCTAT TGAGCCTCGC TGTCGCGCTC
GGCCTCAGCG GCTGTGCCGG CCTGCCTGAT CAACGCCTTG CCAATGAAGC CCTGAAAAAC
GGCGACACTG CATTGGCGGA GCAGAACTAT CGGCAGCTGG CGGACCTGGG CTACAGCGAC
GCGCAAGTCG GCCTGGCCGA TATTCAGGTG AATACCCGCG ACCCGGCGCT GCTCAAGCAG
GCCGAGGCCA CTTACCGCGC CGCCGCACAG ACTTCGCCAC GGGCACAGTC GCGCCTCGGT
CGCCTGCTGG CGGTCAAGCC CGATGCCACT GAGGCCGAGC ATCGCGAAGC CGAAGAGCTG
CTGAAAAAAG CCTTCGCCAA CGGTGAGTCG GGCACGCTGA TACCGCTGGC CATGCTGTAT
CTGCAATACC CGCATACCTT TCCCGAAGTG AATGCGCAGC AGAAAATCAG CCAGTGGCGC
GCTGCCGGCT ATCCAGAAGC CGGTCTGGCG CAAGTGCTGC TGTACCGCAC TCAGGGCACC
TACGCCGAGC ATCTGGATGA AGTCGAAAGC ATCTGCAAAC AGGCGTTGTC GGCCACCGAT
ATCTGCTACG TCGAACTCGC CACGGTCTAC CAGACTCGCG GCCAGACCGA GCAACAGGCG
GCACTGATCG CGCAACTGAG AAGCGCACAC GCTGCCGGTC GCGTCAACGC TCAGCGAGTC
GACAGCGTCG CCCGCGTACT GGGCGATTCC ACTATCGGAA CGCCTGACGA AAAGACTGCT
CAGCAATTGC TCGAAGAGGT TGCGCCGGGT TACCCGATTT CCTGGGTCAC GCTGGCCAAA
CTGCTGTACG ACTTCCCCGA ACTGGGTGAC GTCAACAAGA TGATGGAATA CCTGAACAAT
GGTCGCGCGG CCGATCAACC ACGCGCAGAA CTGCTGCTGG GCCGTCTCTA TTACGAGGGC
AAGTGGGTTC CGGCAGACGC GGTCAAGGCC GAAGAACACC TGAAAAAAGC CACCGCAACG
GAAATCTCTG CCCATTACTA CCTGGGGCAG ATCTACCGTC GTGGCTACCT GGGCCAGGTT
TACCCGCAAA AAGCCGTGGA CGAGCTGCTG ACCGCCGCAC GTGGTGGCCA GAACAGCGCC
GATTTCGCGC TTGCGCAACT GTTCTCGCAG GGCAAGGGCA CGCTGCCCGA CCCGGTCAAC
GCCTGGGTCT TCGCCCAGTT GTCGCTGGCC AGTGAAACCC CGCAAGCCAC TGAGCTTGCC
CAGGCAATGA GTACCCAACT GCCGCCTGAA AAGCTCGCCA CTGCCAAAGA CCTGTTGGCA
CGCGAGCAAA AAGTCCGGGG CGCTTCCGCC ACTCAGAACG CGATGGCGAT GCAGGCCCTG
CAAGAAGAAA AAGACGGTGA GGAAGCACTA TGA
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| Protein sequence | MNSPLRRLST PTLLSLAVAL GLSGCAGLPD QRLANEALKN GDTALAEQNY RQLADLGYSD
AQVGLADIQV NTRDPALLKQ AEATYRAAAQ TSPRAQSRLG RLLAVKPDAT EAEHREAEEL
LKKAFANGES GTLIPLAMLY LQYPHTFPEV NAQQKISQWR AAGYPEAGLA QVLLYRTQGT
YAEHLDEVES ICKQALSATD ICYVELATVY QTRGQTEQQA ALIAQLRSAH AAGRVNAQRV
DSVARVLGDS TIGTPDEKTA QQLLEEVAPG YPISWVTLAK LLYDFPELGD VNKMMEYLNN
GRAADQPRAE LLLGRLYYEG KWVPADAVKA EEHLKKATAT EISAHYYLGQ IYRRGYLGQV
YPQKAVDELL TAARGGQNSA DFALAQLFSQ GKGTLPDPVN AWVFAQLSLA SETPQATELA
QAMSTQLPPE KLATAKDLLA REQKVRGASA TQNAMAMQAL QEEKDGEEAL
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