| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1213 |
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| Symbol | |
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| ID | 1182849 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 1328234 |
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| End bp | 1329109 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637392590 |
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| Product | transcriptional regulator, AraC family |
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| Protein accession | NP_791045 |
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| Protein GI | 28868426 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAGCCA TCGACTCCAT TCAGGTCTTT CAGGCCTTGA GCAGCTCACC CCATGCCCGC
CTTGAGCAAA GCGCGCCGCT GGGCGACGGC TTGATGGCCG CGCAGTGGAA CAATCGGCAC
GACTCGCAGG AATATCACGC GCCGACTCAT CACACGTTGT CGTGTTACAT CGCCGACGGC
ACCGGTACGT TCCGGCGCGG CCAGCCTGAT CAGAAAGGCT CACCGGGCAA ACTCTGCGTG
CTGCCCGCAG GCCACGAGTC GGCCTGGGTG GTGAATGGCG AGATCCGTCT GGCACATTTG
TATTTCAGCC AGGAACACTT CGCGCTGGGC TGCGTGACCC TGCTGGATCG CGAGCCTCGC
GAAATGCAAT TGCGCGAGCA CACCTTCCTC GACGACGAGG TTCAGGCCAG GCGATTCCAG
CAGTTGATTC ACATGAACTG GGCAGAGCCC GGCGAGCGCT TGCTGACCAG CAGCCTGGCG
CACGAGATGG TCAGCCATGC GATGCTCAGT CAGGTAGGGT TGCGCGAGGG TTTACGCCTG
AAAGGCGGAC TGGCTCCGCA CTTGCGGCGT CATCTGGTGG ACTTCATCGA AATGCACCTG
GCCGACCCGC TGAGCCTTGG CCAACTGGCG GGGCTGTGTG CGCTGTCGGA ATACCACTTC
GCACGCATGT TCCGCGAAAG TTTCGGCCTG CCGCCGCATC AATACCTGTT GGCACGACGC
ATCGACCAGG CCCGCCGGTT GCTGCGCCAG ACAACCACAC CGCTGGGCGA GATCGCCCTG
GCCTGCGGCT TTGCCAGCGC GAGCCATTTC AGCAACCGGT TTCGCCAGGC CGTGGGCGCC
ACACCGGGCG AATATCGTCT GGCGCTAGGC CAATAA
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| Protein sequence | MSAIDSIQVF QALSSSPHAR LEQSAPLGDG LMAAQWNNRH DSQEYHAPTH HTLSCYIADG
TGTFRRGQPD QKGSPGKLCV LPAGHESAWV VNGEIRLAHL YFSQEHFALG CVTLLDREPR
EMQLREHTFL DDEVQARRFQ QLIHMNWAEP GERLLTSSLA HEMVSHAMLS QVGLREGLRL
KGGLAPHLRR HLVDFIEMHL ADPLSLGQLA GLCALSEYHF ARMFRESFGL PPHQYLLARR
IDQARRLLRQ TTTPLGEIAL ACGFASASHF SNRFRQAVGA TPGEYRLALG Q
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