| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1183 |
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| Symbol | |
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| ID | 1182819 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 1295825 |
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| End bp | 1296535 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637392560 |
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| Product | oxidoreductase, short chain dehydrogenase/reductase family |
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| Protein accession | NP_791015 |
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| Protein GI | 28868396 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.787877 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCATTAT CTTCTGCACC GATCCTGATT ACCGGCGCCA GCCAGCGCGT GGGCCTGCAT
TGCGCGCTGC GCCTGCTTGA ACACGGGCAT CAGGTCATCA TCAGTTACCG AACCGAACAC
GCCAGTGTGG CCCAACTGCG CCAGGCCGGT GCGCATACCC TGCACGGCGA TTTTTCGAGC
GAAGCCTCGA TCATGGCGTT CATCGAGCAG TTGAAATCCC ACACCTCAAG CCTGCGTGCC
ATTGTGCACA ACGCGTCCGA GTGGCTGGCT GAAACGCCAG GCGACGAAGC CGAAAACTTC
ACGCGCATGT TCAGCGTGCA CATGCTCGCC CCGTACCTCA TCAACCTGCA TTGCGAGGCA
CTGTTACACG CCAGCGACGT CGCCGACATC GTGCACATCA GCGATGACGT GACCCGCAAG
GGCAGCAGCA AGCACATTGC CTATTGCGCA ACCAAGGCCG GGCTGGAAAG CCTCACCCTG
TCGTTCGCCG CAAGGTTCGC CCCGCTTGTC AAAGTCAACG GCATAGCACC GGCGCTGTTG
ATGTTTCAAC CCAAGGACGA TGCGGCCTAC CGCGCCAACG CCCTGGCCAA GTCGGCTATG
GGCATAGAGC CTGGTGCAGA AGTGATCTAC CAGAGCCTGC GCTACCTTCT GGACAGCACC
TATGTCACCG GCACAACACT GACCGTAAAC GGCGGACGGC ACGTCAAGTA A
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| Protein sequence | MALSSAPILI TGASQRVGLH CALRLLEHGH QVIISYRTEH ASVAQLRQAG AHTLHGDFSS
EASIMAFIEQ LKSHTSSLRA IVHNASEWLA ETPGDEAENF TRMFSVHMLA PYLINLHCEA
LLHASDVADI VHISDDVTRK GSSKHIAYCA TKAGLESLTL SFAARFAPLV KVNGIAPALL
MFQPKDDAAY RANALAKSAM GIEPGAEVIY QSLRYLLDST YVTGTTLTVN GGRHVK
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