Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_1165 |
Symbol | |
ID | 1182801 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 1278328 |
End bp | 1279428 |
Gene Length | 1101 bp |
Protein Length | 366 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 637392542 |
Product | hypothetical protein |
Protein accession | NP_790997 |
Protein GI | 28868378 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.45098 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTTCTTTT TTCACATGCT GCCTTCATGG GATAGCATAC GGCGACAGCT TGACCGCGAT ATAGCGCCCT ACAGAGGTGG CCATTTTCGC ACACCCCGAA ATGAACCCGT CCCGTCGCCC GCATTGATCA TGCGCCGTTT CAATTGCGTC CGGTCCGCGT TTGACCGTGC CGAATGGGAA GCTTGCCGCA TACTGGGACA GCGGTTCGTC GATCTCGATA TCTCCAGCAT CATCAAAGAC TTGATCGATG TCGTTACTCA GATGGCCATG ATCGTCGTAG GCAGTGCTTT TGTCGGAGGG GCGGCCGGTG CAGGTGCGGG CGTACTTTTT TTCGGGGTGG GCGCTGTTCC TGGTGGTTTG ATGGGGGCTG CGTTGGGTGC CCAGGCCAGT GCCTTCATAT TAGGGATACT GGGTCTGGAG GCCATCGCCG AATCCGTCAT CGACGGCTTT CCGCGCATCA TTGAATACTA CACTCGTGGT ATCACCACAG CATGGCAAGG CCCCCGCGAA CAAGGGCGGA ACCCGTTCAT GGGAGACGAC CTGGCTGCAC AGAACAGTGC TGTTCAGGAA ATCGCCCAAG GGCACGTTGA AGTGGTGATT CTGCTATTGG GCGCGATGGT TCAGTACATC ACACGCGGTC GCGGTAATGC TCGTGCTCTG GCGAATGAAA TGCGAGCCAG CGCTAAAGGC GAGCGATTGG GCCAGTGGAT GCTTGAGCAT GAAGATGAGC TGAAGAAGCG ACCTGATTTG CAGAGGCCTG AGCCGCGGAG GGGGGCGCTG GAAGCTCAAG AGACTTTGTC AACAAATCGC TCAAAGACCG CAGACGCAGC TAAACCAGAT GCAATGGATC AAAAAACTGT TTCAAGCAAG ATAGATCCAA AACAATTAGA TCTTGTAACG GGTCACCCCA ACGCACACTC CCTAAGTGTT CACGGTGGTA AAGTCTCTGA TGGAGACCTA ATGCTCCGGG CAAAATCAGC CATTAAGCCG AACGGAGACG TCGGCCCGTC AGTCCCACCT TTATCATCGG CTTTCCACAG CGATGAATTA TTGATTTTTG CTGACCAAAC CATTAGGGAA ACTCTGAAAA AGGTTTCCTG A
|
Protein sequence | MFFFHMLPSW DSIRRQLDRD IAPYRGGHFR TPRNEPVPSP ALIMRRFNCV RSAFDRAEWE ACRILGQRFV DLDISSIIKD LIDVVTQMAM IVVGSAFVGG AAGAGAGVLF FGVGAVPGGL MGAALGAQAS AFILGILGLE AIAESVIDGF PRIIEYYTRG ITTAWQGPRE QGRNPFMGDD LAAQNSAVQE IAQGHVEVVI LLLGAMVQYI TRGRGNARAL ANEMRASAKG ERLGQWMLEH EDELKKRPDL QRPEPRRGAL EAQETLSTNR SKTADAAKPD AMDQKTVSSK IDPKQLDLVT GHPNAHSLSV HGGKVSDGDL MLRAKSAIKP NGDVGPSVPP LSSAFHSDEL LIFADQTIRE TLKKVS
|
| |