Gene PSPTO_1165 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_1165 
Symbol 
ID1182801 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp1278328 
End bp1279428 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content54% 
IMG OID637392542 
Producthypothetical protein 
Protein accessionNP_790997 
Protein GI28868378 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.45098 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTCTTTT TTCACATGCT GCCTTCATGG GATAGCATAC GGCGACAGCT TGACCGCGAT 
ATAGCGCCCT ACAGAGGTGG CCATTTTCGC ACACCCCGAA ATGAACCCGT CCCGTCGCCC
GCATTGATCA TGCGCCGTTT CAATTGCGTC CGGTCCGCGT TTGACCGTGC CGAATGGGAA
GCTTGCCGCA TACTGGGACA GCGGTTCGTC GATCTCGATA TCTCCAGCAT CATCAAAGAC
TTGATCGATG TCGTTACTCA GATGGCCATG ATCGTCGTAG GCAGTGCTTT TGTCGGAGGG
GCGGCCGGTG CAGGTGCGGG CGTACTTTTT TTCGGGGTGG GCGCTGTTCC TGGTGGTTTG
ATGGGGGCTG CGTTGGGTGC CCAGGCCAGT GCCTTCATAT TAGGGATACT GGGTCTGGAG
GCCATCGCCG AATCCGTCAT CGACGGCTTT CCGCGCATCA TTGAATACTA CACTCGTGGT
ATCACCACAG CATGGCAAGG CCCCCGCGAA CAAGGGCGGA ACCCGTTCAT GGGAGACGAC
CTGGCTGCAC AGAACAGTGC TGTTCAGGAA ATCGCCCAAG GGCACGTTGA AGTGGTGATT
CTGCTATTGG GCGCGATGGT TCAGTACATC ACACGCGGTC GCGGTAATGC TCGTGCTCTG
GCGAATGAAA TGCGAGCCAG CGCTAAAGGC GAGCGATTGG GCCAGTGGAT GCTTGAGCAT
GAAGATGAGC TGAAGAAGCG ACCTGATTTG CAGAGGCCTG AGCCGCGGAG GGGGGCGCTG
GAAGCTCAAG AGACTTTGTC AACAAATCGC TCAAAGACCG CAGACGCAGC TAAACCAGAT
GCAATGGATC AAAAAACTGT TTCAAGCAAG ATAGATCCAA AACAATTAGA TCTTGTAACG
GGTCACCCCA ACGCACACTC CCTAAGTGTT CACGGTGGTA AAGTCTCTGA TGGAGACCTA
ATGCTCCGGG CAAAATCAGC CATTAAGCCG AACGGAGACG TCGGCCCGTC AGTCCCACCT
TTATCATCGG CTTTCCACAG CGATGAATTA TTGATTTTTG CTGACCAAAC CATTAGGGAA
ACTCTGAAAA AGGTTTCCTG A
 
Protein sequence
MFFFHMLPSW DSIRRQLDRD IAPYRGGHFR TPRNEPVPSP ALIMRRFNCV RSAFDRAEWE 
ACRILGQRFV DLDISSIIKD LIDVVTQMAM IVVGSAFVGG AAGAGAGVLF FGVGAVPGGL
MGAALGAQAS AFILGILGLE AIAESVIDGF PRIIEYYTRG ITTAWQGPRE QGRNPFMGDD
LAAQNSAVQE IAQGHVEVVI LLLGAMVQYI TRGRGNARAL ANEMRASAKG ERLGQWMLEH
EDELKKRPDL QRPEPRRGAL EAQETLSTNR SKTADAAKPD AMDQKTVSSK IDPKQLDLVT
GHPNAHSLSV HGGKVSDGDL MLRAKSAIKP NGDVGPSVPP LSSAFHSDEL LIFADQTIRE
TLKKVS