| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1156 |
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| Symbol | |
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| ID | 1182792 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 1269514 |
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| End bp | 1270254 |
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| Gene Length | 741 bp |
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| Protein Length | 246 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637392535 |
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| Product | isochorismatase family protein |
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| Protein accession | NP_790990 |
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| Protein GI | 28868371 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1335] Amidases related to nicotinamidase |
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| TIGRFAM ID | [TIGR03614] pyrimidine utilization protein B |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGCTC CGCTAAGCGT CGCAGGCGTC GACCTGCCGC AGGATGATCA GCCTGCCCGT
GTGCTGCCGG CCCGGCCCGA AGCGCTGCGT ATGAAGCTCG GCGAAACGGC GCTGGTGGTG
GTTGACATGC AGAATGCCTA CGCATCGCTC GGCGGTTATC TGGACCTGGC CGGGTTCGAT
GTCAGCAGCA CCGGGCCGGT CATCGCCAAC ATCAAGCGGG CCTGCGCAGC TGCACGAGCC
GCTGGCATGC CGGTGATCTT TTTTCAGAAC GGCTGGGACC CGGCCTACGT CGAGGCCGGT
GGCCCCGGTT CGCCGAACTG GCACAAGTCC AACGCCTTGA AAACCATGCG CAAACGCCCG
GAACTCGAAG GGCAATTGCT GGCCAAGGGC GGCTGGGACT ATCAACTGGT CGACGAGCTG
AAGCCCGAGC CAGGCGACAT CGTGGTACCG AAAATCCGTT ACAGCGGCTT TTTCAATTCC
AGTTTCGACA GCATGTTGCG CAGTCGCGGT ATTCGCAACC TGGTGTTCAC CGGCATCGCG
ACCAATGTCT GCGTCGAATC GACCCTGCGT GACGGCTTCC ACCTGGAGTA TTTCGGTGTG
GTGCTGGCAG ATGCCACCCA TCAGGCAGGT CCGGAATTCG CCCAGCAGGC CGCCCTGTTC
AACATCGAAA CGTTCTTCGG CTGGGTATCC AGCGTCGATG ACTTCTGCAC CACTTTCAGC
CCTTTCGGGC AACCTTTGTG A
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| Protein sequence | MTAPLSVAGV DLPQDDQPAR VLPARPEALR MKLGETALVV VDMQNAYASL GGYLDLAGFD
VSSTGPVIAN IKRACAAARA AGMPVIFFQN GWDPAYVEAG GPGSPNWHKS NALKTMRKRP
ELEGQLLAKG GWDYQLVDEL KPEPGDIVVP KIRYSGFFNS SFDSMLRSRG IRNLVFTGIA
TNVCVESTLR DGFHLEYFGV VLADATHQAG PEFAQQAALF NIETFFGWVS SVDDFCTTFS
PFGQPL
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