| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1134 |
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| Symbol | |
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| ID | 1182770 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 1245872 |
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| End bp | 1246693 |
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| Gene Length | 822 bp |
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| Protein Length | 273 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637392513 |
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| Product | amino acid ABC transporter, periplasmic amino acid-binding protein |
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| Protein accession | NP_790968 |
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| Protein GI | 28868349 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.14207 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAATTATC GCGCGCTGCT GGGCATTGGC CTGGTCACTC TGGCTGCCTC CACTCAAGCC
CTGGCCGGTG CCACGCTGGA TCGCGTGCAG AAAAACAAAG AGCTGGTCAA CGTCCTGATG
GAAAGTTACC CGCCCTTCTC TTTCCTGAAT GACAAGAACG AACTGGACGG TTTCGACGTG
GATGTCGCCA AGGCCGTGGC GCAGAAGCTG GGCGTCAAGT TGCGCCTCGA AACACCATCA
TGGGACGTCA TCGCCGCAGG TCACTGGAGC GGCCGTTACG ACATCTGCGT CTGCTCGATG
ACCCCAAGCA AGGCTCGTGC TGAAGTCTTC AACTTCCCGG TCGAGTATTA CGCGTCGCCT
GCGGTGATCG TGGTCAATGC CAGCGATGAC CGTATCCATT CAGCCAAGGA CCTGAGCGGC
AAGAAAGTCG GCCTGACCAG CGCGTCGAGT TACGAGAGCT ACCTGAACAA GAACCTGGTC
ATCGACGGCG CGGAAGACAA GCCGCTGCAG TACCCGTTCG ACGACGTGCA GATTGCCCCG
TACGACAACG ACAATGTGGC GTTTCAAGAC TTAGGGCTTG GCGCTGGCAA GCGGCTGGAC
GCGATACTGA CCAATCTGGT GACGGCAAAA CCGCGCCTGG ATCAGGACAA GCGCTTCAAA
CTGGCGGGCG AAACGCTGTA CGAAGAACCC AACTCCGTGG CCATCGAAAA GAACGACCCG
GAATGGGACG CCAAGGTTCG CGAGGTGTTC GCCGAGCTCA AGAAAGACGG CACCCTGAGC
ACGCTGTCGC AAAAGTGGAT TGGCGCTGAC ATCAGCAAAT GA
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| Protein sequence | MNYRALLGIG LVTLAASTQA LAGATLDRVQ KNKELVNVLM ESYPPFSFLN DKNELDGFDV
DVAKAVAQKL GVKLRLETPS WDVIAAGHWS GRYDICVCSM TPSKARAEVF NFPVEYYASP
AVIVVNASDD RIHSAKDLSG KKVGLTSASS YESYLNKNLV IDGAEDKPLQ YPFDDVQIAP
YDNDNVAFQD LGLGAGKRLD AILTNLVTAK PRLDQDKRFK LAGETLYEEP NSVAIEKNDP
EWDAKVREVF AELKKDGTLS TLSQKWIGAD ISK
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