| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1084 |
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| Symbol | |
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| ID | 1182719 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 1190000 |
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| End bp | 1190890 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637392462 |
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| Product | integrase/recombinase XerD, putative |
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| Protein accession | NP_790918 |
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| Protein GI | 28868299 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.636718 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCTTTC TGGAGTTCTT CACGGCCAAT ATTCGCAACC CAAATACCCG CAGGGCTTAT
GCCAGGGCCA CCCAGGAGTT CTTGACCTGG TGTCAGGTTG TAGGTGTCCC CAGCCTGACT
GAAGTGTCCC CGCTGCACGT CGCCACGTGG ATCGAGCTGC AGATGCAGAC ATTGGCCGCC
CCCTCGGTGA AACAGCGTCT GGCCGCAATC AGGCACCTGT TCGATTGGCT GGTGGTAGGT
CAGGTCGTGC CCCATAACCC CGCCGCCTCG GTGCGTGGGC CCAGTCATAC CAGCCGCACC
GGCAAGACGC CGGTACTGGA GCCCTTGGAA GCGCGGCAGC TGCTGGACAG CATCGATATC
TGCACCCCGG CAGGCCTGCG CGACCGGGCG CTGATAGCAT TGATGGTGTT TTCCTTTGCC
AGGATCGGCG CAGCCTTGGC GATGAAGGTC GAGGATGTCT ATATCCAGAA CCAGCGGCTG
TGGGTGCGAT TAAAGGAAAA GGGCGGCAAG CAGCATGTAA TGCCCTGTCA ACACTCGCTA
GAAGCGTACC TGCATGCATA CCTAGTTGAG ACCGGTATTG ACAATGATCC AAAAGGGCCG
CTGTTCCGTA CGATTGGGCG GGGTACCGAG CAGCTGAGCG TTAACGCCCT GCCGCAGGCC
AATGCCCATG CGATGGTGCG CCGACGTGCC TTGGCGGCAG GGATCAAAAC GTCAATCGGC
AACCATACAT TCCGGGCCAC CGGAATCACG GCCTACCTGA AGAATGGCGG CACCCTAGAA
AATGCAGCGG CGATGGCCAA TCACGCGTCG ACGCGTACTA CGCAGCTATA TGACCGGCGA
CGTGACGAGA TCAGCCTTGA CGAGGTCGAG CGGATACGAC TGGATCGCTA G
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| Protein sequence | MRFLEFFTAN IRNPNTRRAY ARATQEFLTW CQVVGVPSLT EVSPLHVATW IELQMQTLAA
PSVKQRLAAI RHLFDWLVVG QVVPHNPAAS VRGPSHTSRT GKTPVLEPLE ARQLLDSIDI
CTPAGLRDRA LIALMVFSFA RIGAALAMKV EDVYIQNQRL WVRLKEKGGK QHVMPCQHSL
EAYLHAYLVE TGIDNDPKGP LFRTIGRGTE QLSVNALPQA NAHAMVRRRA LAAGIKTSIG
NHTFRATGIT AYLKNGGTLE NAAAMANHAS TRTTQLYDRR RDEISLDEVE RIRLDR
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