| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1078 |
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| Symbol | |
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| ID | 1182713 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 1182707 |
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| End bp | 1183636 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637392456 |
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| Product | lipopolysaccharide biosynthesis protein |
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| Protein accession | NP_790912 |
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| Protein GI | 28868293 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.952222 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTTCTG TTTTCCCAAA GGTGGCCGTG CTACTGGCAG CCTACAACGG TATGGCATGG
ATAGAGGCGC AACTTGACTC CATCCTGAAG CAGGCAAACG TCTGCGTCAG TGTATTCATC
AGTGTCGATA CCTCCTCGGA CGGCACTGAA GCGTGGTGTG CTGACTATGC GCAGCACCAC
GTGAACATCA CCCTGCTACC GCCCGCCGGC CAATTTGGCG GAGCGTCACG CAACTTCTTT
CGCTTGATTC AAGATGTCGA CTTCTCTTCG TTTGATTACG TAGCGTTCTC CGATCAGGAC
GATATCTGGT ATCAGGACAA GCTTGAACGC GCCTTATCGA CGCTGATGTC GGGCAACCAT
GATGCCTACT CAAGCAATGT CGTCGCCTTC TGGCCCGATG GGCAACGAAT CTTGCTGGAC
AAGGCCCAAC CGCAGGTCCA GTGGGACCAC CTGTTTGAAG CTGCAGGCCC AGGCTGCACC
TACGTAATGA ACCGCCCGCT CGCCGATGCA TTCAAGTCAT CGCTCATAGC ACAGTGGGAC
GTGGCTCAAA ACGTCAGCCT GCACGACTGG TATTGCTATG CGTTTGCGCG CAGCCACGGC
TTCCGCTGGT TTATCGACCC AGCCCCCGGC ATGGATTATC GCCAACACGC CAATAACCAG
GTCGGTGCAA ATACCGGACT CGCCTCACTC ATTACTCGCC TGAAAAAGAT TGCCGATGGC
TGGTGGGCCG GGCAAGTGCT GCTGATTGGC CGTTTGACAG GCGGCAGCGA AACGCTATTT
GCAGGAAAGA TAACCGGTAC GCGATGGATG TTTCTTCGGC TCGCGTTCAT GGCAGGGCGT
TGCAGAAGAA GGCCCCGGGA CAAGATTTTC TTCATCATCG CTTGCCTAGC AGCCATGCTG
AACACACCTG AGCAGCGAAA TAATCGCTAG
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| Protein sequence | MSSVFPKVAV LLAAYNGMAW IEAQLDSILK QANVCVSVFI SVDTSSDGTE AWCADYAQHH
VNITLLPPAG QFGGASRNFF RLIQDVDFSS FDYVAFSDQD DIWYQDKLER ALSTLMSGNH
DAYSSNVVAF WPDGQRILLD KAQPQVQWDH LFEAAGPGCT YVMNRPLADA FKSSLIAQWD
VAQNVSLHDW YCYAFARSHG FRWFIDPAPG MDYRQHANNQ VGANTGLASL ITRLKKIADG
WWAGQVLLIG RLTGGSETLF AGKITGTRWM FLRLAFMAGR CRRRPRDKIF FIIACLAAML
NTPEQRNNR
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