| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1048 |
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| Symbol | |
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| ID | 1182682 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 1145233 |
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| End bp | 1146204 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637392427 |
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| Product | hypothetical protein |
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| Protein accession | NP_790884 |
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| Protein GI | 28868265 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG5006] Predicted permease, DMT superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.766524 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCGCCC CTGCCCTGTT CCCCCGTCAC ATTGCCGTGC TGATCCTCGC GCTGCTGGCC
TGCTCGTTTG CCGGCAATCA CATTGCCGCA CGTATTGCCT TCGATCATGA CACCGGTCTG
CTGCTGGCCA TCCTTTGTCG CTCTGGCATG ACCTTGCTGG TACTCACCAG CCTGGTGCTG
TGGCAACGTG AAACACTCAG TCTGCCGGCC AGCACTTGGC GCTGGCAGTT GTTGCTCGGG
CTGCTGATCG CGACCCAAAG CTTTTGCATC TATTCGGCAG TGGCGCGCAT TCCGGTCGCG
TTGGCGTTAC TGGTGGTCAA TGTCTCGCCG ATCCTGCTGG CGTTGCTGAC CTGGGCGCTG
GGCGGTGCCA GGCCGACACG CCGTGCGGCA GGCCTGATGG CGCTGATTCT GTTTGGCCTG
ACACTGGCGC TGGACGTACC GCAGCGGTTG TCGAACCCGG GCAGCAGCGA GCCGCAGTGG
CTGGAGGGCA TCGCCTACGC GGGCACCGCC GCGGTGGTAT TCGCGTTCGC ACTGTGGATA
ACCGATAACA AACTGGCGGG CATGCGCGGC AGCGTTCGCA GCATGCTGAC CATGGCCGTG
GTGTTTGTGG TAGCAGCCGT TGCAGGCAGC AGTGGCGTAT TGCCCGGCGG CGTGGATCTC
CCCTCCAGCC GAATCGGCTG GACCGCACTG GCGAGTCTGG TGCTGCTCTA CGGGCTGGGT
TTCTCGCTGC TGTTCATCTG TATGGCGCGT CTGGACATCA GCCGCAATGC TCCGGTGATG
AACATCGAGC CGGTGGCGAG CCTGCTGTTC GGCTGGCTGA TTCTCGATCA GTTGCTCAGC
AGCGGCCAGA TCCTCGGCGG GCTGATCGTG GTCAGCGGCA TTGTGCTGCT GACCTGGCGC
CGCGCCACCC CGCAAGCCCC CCAACCACCC GACAAGGCCC TGCATCATGC CCGTGAACGT
TCTGACCCTT GA
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| Protein sequence | MSAPALFPRH IAVLILALLA CSFAGNHIAA RIAFDHDTGL LLAILCRSGM TLLVLTSLVL
WQRETLSLPA STWRWQLLLG LLIATQSFCI YSAVARIPVA LALLVVNVSP ILLALLTWAL
GGARPTRRAA GLMALILFGL TLALDVPQRL SNPGSSEPQW LEGIAYAGTA AVVFAFALWI
TDNKLAGMRG SVRSMLTMAV VFVVAAVAGS SGVLPGGVDL PSSRIGWTAL ASLVLLYGLG
FSLLFICMAR LDISRNAPVM NIEPVASLLF GWLILDQLLS SGQILGGLIV VSGIVLLTWR
RATPQAPQPP DKALHHARER SDP
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