| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1046 |
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| Symbol | |
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| ID | 1182680 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 1144032 |
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| End bp | 1144262 |
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| Gene Length | 231 bp |
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| Protein Length | 76 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 637392425 |
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| Product | virulence-associated protein, putative |
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| Protein accession | NP_790882 |
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| Protein GI | 28868263 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4456] Virulence-associated protein and related proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGAACAAT CCACAGTCTT CAAAAGCAAT CGAAGTCAGG CTGTTCGACT TCCAAAAGCG
GTGGCATTGC CCGACGACGT GAAACGGGTA GACGTGGTAG CAGTGGGCAG GACACGCATC
ATTTCCCCTG CTGGTGAAAT GTGGAACAGT TGGTTCGATG GTGAAAGTGT CAGTGATGAC
TTCATGGCAG AGCGCGAGCA GCCAGTTGAA CAACTGCGCG AATCACTCTG A
|
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| Protein sequence | MEQSTVFKSN RSQAVRLPKA VALPDDVKRV DVVAVGRTRI ISPAGEMWNS WFDGESVSDD
FMAEREQPVE QLRESL
|
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