Gene PSPTO_1038 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_1038 
Symbol 
ID1182672 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand- 
Start bp1137765 
End bp1138214 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content63% 
IMG OID637392417 
Producthypothetical protein 
Protein accessionNP_790874 
Protein GI28868255 
COG category[S] Function unknown 
COG ID[COG5642] Uncharacterized conserved protein 
TIGRFAM ID[TIGR02293] putative toxin-antitoxin system antitoxin component, TIGR02293 family 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTCTGC CCATCAGCGA TTACCATCCC GCCCTGCCCC GGCAGGACGA TTTCTGGCAG 
CACCTCGGTA TTCCGGCGCG TGGCACCCGT TTGTACACAG CGCTGCACAG CGGCTTGCCC 
TATGAAGTGT TCGAGCGCCT GGCGCACTAC ACCGACCTGA ACCGCTCGAC GCTGGCTGAA 
CATCTGGGTA TCGCCCCGGC GACCTTGCAG CGGCGCCTCA AGGTGCGCCG CTTCAATGCC 
GAGGAAAGTG ACCGTTTGTT TCGTCTGGCA GCCGTCTACA AGGCGGCACT GGACCTGTTT 
GAAGACGACA CCGAAGCCAC GCGTCTGTGG CTGGCCAATC CGGTCTATGG GCTGGGCAAT 
CGCAGACCGC TGGAAATGCT CGCCACCTCA GCCGAAGCCC AGGCCGTGCT GGACCTGATC 
GGCCGGCTGG AACACGGAGT CGTGGCGTGA
 
Protein sequence
MSLPISDYHP ALPRQDDFWQ HLGIPARGTR LYTALHSGLP YEVFERLAHY TDLNRSTLAE 
HLGIAPATLQ RRLKVRRFNA EESDRLFRLA AVYKAALDLF EDDTEATRLW LANPVYGLGN 
RRPLEMLATS AEAQAVLDLI GRLEHGVVA