Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_1035 |
Symbol | |
ID | 1182669 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 1135027 |
End bp | 1136406 |
Gene Length | 1380 bp |
Protein Length | 459 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 637392414 |
Product | colicin/pyosin nuclease family protein |
Protein accession | NP_790871 |
Protein GI | 28868252 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGACCAGGC TTGCTGTTGA AGCTGCAGAA CAAGCACGCC TTGCAGCAGA GGTCGAAGCT CAACGGATTG CTGCCGAAAC CGCTGAACAT GCCCGAGTAG TAGCGGAGGC TGAAGCCAAG CGAGTAGCGG ATGAGCAGGC ACTCTTTGCT GCGGAAGCAG AAGCTCACCG AATAACTGCC GAAGCTGCTG AACAAGCTCG TATGGAGGCA GAGGCGCAAG CACAGCGTGA CGCTGACGAG CACGCGCGCG TGACGGCAGA AGCTCAAGCG CTAGAAGCGG GCAAGACGCT CAGGCTCCCG GAAGCTGGTA CACCTCAGTT AGGTGCAGTT GCAGGAGTCA TTTCCGTTAC AGCAGGATCC GGCCTCTTTC TGGACGCTAC CATTCAAGCC GCTATCGAAA TATTAGCGGC TCTCGTAGGC ACAGCTGTGA GCTCTACCAC AGCCGTAGGC ATCGGCACGT TGCTGTACTC CCCTTCGCTT GGCAATGGAG AGTTACCGGG AAGAATGCTG GACCTTCCGG CCAGGGTTCT GATGCCTGAT CTGCCCGACG CCTTGAATGA CGTGGCGGCA ACGGGTGGAA CGGTCGATAT GCCCTATAGA ATTTACGGTG ATCAGTCGAA GTATTCAGTC GTGGCAACAC AGCCCGAAGG CGGATTTTCT CCCAAGGTGC CTGTGAGGGC TCTGATACTG GACCCAGTGG CCAACGCCTA CACCTTTACC ACTTCGGACA CCCCGCCCAT CACCTTAACG TTTCCAATCG CAGCACCTGA AAACAGCTCA ACGACTACAG TGGCACAACC GATAGAAACT CCGGCGTACA CTGGCATTAC GCTGGAGCCT ATCGAGGTGA AGGCAGAACC TTTACCCGCA ACCAGCCCGC TGGATATTCG GGATGCCATT TACGTTTATC CGGTAAATTC GGGTTTACCA CCGGTTTACG TGGTGTTCAG CAGCCCGTAT GAAGGGGCAA CCACCAAAGG GGAGCATAGC GGTCGAATGT ACGATCCTGA TAATGCGGGA GGCCCAACCC AGAACCTCGA CTGGACAACC GCCTCAGTCA CCCAGAACGG CATTGATCTG GTTAAATTGC ATACAGGCCG ATTTGAGCCG TCAGACGCAA ACGCCGTCAT GATTGATCGT CTGGAAAAAA TTCTTCGTAG CGAGTTATCC ATGACGGATA CCGATAAAAG ATTTTATACT CACGAGCTCA GGGAGCTGGA ACGTTATAGG GCACTGGGCG TTGCTGATGG AGTGGAGGGG GAGGTATGGA ACAATGCTCA TACTGCGACC TTGGAAGACT ATAAGCTAAA AGACTCTTCA GAATCATTTT ATACACCTGA AGCAATAACA GCAGAAAACA AACAGGTTTA TGGAGAATAA
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Protein sequence | MTRLAVEAAE QARLAAEVEA QRIAAETAEH ARVVAEAEAK RVADEQALFA AEAEAHRITA EAAEQARMEA EAQAQRDADE HARVTAEAQA LEAGKTLRLP EAGTPQLGAV AGVISVTAGS GLFLDATIQA AIEILAALVG TAVSSTTAVG IGTLLYSPSL GNGELPGRML DLPARVLMPD LPDALNDVAA TGGTVDMPYR IYGDQSKYSV VATQPEGGFS PKVPVRALIL DPVANAYTFT TSDTPPITLT FPIAAPENSS TTTVAQPIET PAYTGITLEP IEVKAEPLPA TSPLDIRDAI YVYPVNSGLP PVYVVFSSPY EGATTKGEHS GRMYDPDNAG GPTQNLDWTT ASVTQNGIDL VKLHTGRFEP SDANAVMIDR LEKILRSELS MTDTDKRFYT HELRELERYR ALGVADGVEG EVWNNAHTAT LEDYKLKDSS ESFYTPEAIT AENKQVYGE
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