Gene PSPTO_1034 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_1034 
SymbolwssI 
ID1182668 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp1133503 
End bp1134654 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content64% 
IMG OID637392413 
Productcell morphology protein 
Protein accessionNP_790870 
Protein GI28868251 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGCTC CGTCTGCTGT ACCGCCTCCA CCCAGCGAAC TGGCCGTGCG CACCTGTGGC 
GCGGCGGGCA TCACGCTGGC GGTTTTCATC GGCGTCGGCT TGCTGGCCTC GTGCATGCTG
CTAGCCAGCG GCAAGGTCGA GTTGCTGCCC AAACCCCTGA CCCTCGAGGC AGCGCTGCAT
GGCGAGGTGA CTCACAAACT GGCCAGGCAA CTGTCAGGGA CTTTTCTGGC GCAGCGCGCA
GCGGATATCG AGCGTGGCGC AAGCTGGTTG CTGTTTCACG ACACCGGCCC GCGGGTCCGT
CAGGGGTGTC CGGGCTGGCT GTTCCTGACC GATGAATTCA GGCTCAATCG CGACGCGCAG
GCCAATGCGC AACACAAGGC GCAGGCGGTC ATCGATGTGC AACGCAGCCT GAAAAAGCGC
GGCATCGACC TGCTGGTCGC CGTGGTGCCA GACAAAAGCC GCATTGCTGC AGCCCAGCTG
TGCGGGCTGT ATCGCCCCGA CGTGCAGCAG GCCCGAGTTG CGCAATGGAC CAACAGCCTG
AAAGCCGCCG GTGTCGATAC GCTGGACCTG ACCGCTACCC TGCAACCGCT GGGTGAAACG
GCATACCTGC GCACCGACAC GCACTGGAGC GAATGCGGTG CCAACGCGGC CGCCAGAGCG
CTGGCACTGC ACCTGCGCAA AGCCGGCTTT CAGGCCACTC CGCAACGGCA GTTTCAAACC
AGCATCGCCC CGATTGCCGA GCGCCCCGGC GATCTGGTGC GTTTAGCGGG TCTCGACTGG
CTACCGCTGT CGTTGCAGCC TGCCGCACAG AGCGTAGCCG CCACGCAAAT CACCGAGCTT
GCCAGCGACG CGGCGGCAGG CGGCGACAAC CTCGACGACC TGTTCGGCGA CAGCAACCTG
CCCAACGTCG CCTTGATCGG CACATCGTTC TCGCGCAATT CGGGTTTTGT CGGGTTTCTA
CAGCGCGAAC TCGGCGCACC GATCGGCAAC TTCGCCAAGG ACGGCGGCGA GTTCTCGGGC
GCTGCCAACG TCTATTTCGA CAACCCGGCC TTTCGCCAGA CCCCGCCGAA GCTGCTGATC
TGGGAAATCC CGGAGCGGGA TCTGCAGACG GTTTATGAGG TGGTCGACAA ATTAGATGTG
CCTGTAAAAT AA
 
Protein sequence
MTAPSAVPPP PSELAVRTCG AAGITLAVFI GVGLLASCML LASGKVELLP KPLTLEAALH 
GEVTHKLARQ LSGTFLAQRA ADIERGASWL LFHDTGPRVR QGCPGWLFLT DEFRLNRDAQ
ANAQHKAQAV IDVQRSLKKR GIDLLVAVVP DKSRIAAAQL CGLYRPDVQQ ARVAQWTNSL
KAAGVDTLDL TATLQPLGET AYLRTDTHWS ECGANAAARA LALHLRKAGF QATPQRQFQT
SIAPIAERPG DLVRLAGLDW LPLSLQPAAQ SVAATQITEL ASDAAAGGDN LDDLFGDSNL
PNVALIGTSF SRNSGFVGFL QRELGAPIGN FAKDGGEFSG AANVYFDNPA FRQTPPKLLI
WEIPERDLQT VYEVVDKLDV PVK