Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_1030 |
Symbol | wssE |
ID | 1182664 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 1127013 |
End bp | 1130705 |
Gene Length | 3693 bp |
Protein Length | 1230 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637392409 |
Product | cellulose synthase operon protein C |
Protein accession | NP_790866 |
Protein GI | 28868247 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG3071] Uncharacterized enzyme of heme biosynthesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGCCTGA TCGGCGTCAA ACAGAACAAA CCGCAACAGG CGCAGACCTA CCTGACGCGC CTGCAAGCGC TGTCGCCAGC GCCCTGGCAG GCGGTGCAGC TGGAGCAGGA CATTGCCCTC GGCCAGCCGC AAAATCAGGC GCTGCTGGAT GATGCCCGAC GCCTGGCCGA CGCCGGTGAG CGTGACAAGG CGACCGGGGT GTTTCGCCAG TTGTTCAACG GCCGTTTGCC TCAAGGCACT GTCGGCCGCG AGTACTACAC CAACCTGGGC TTCAACAATG CGGACTGGCC CGAGGCGCGC AAGGGTTTTG AACGCCTGAT GCGGCAGAAC CCTGACGACT CGATTCTGGC GCTGTTCTTT GCCAAGCACC TGGCCCGCCG CGAAGACAGC CGCGCCGAAG GCATCGCCGC TCTGGCGCGC CTGAGCACTC ATCCGGACAT CGCCGGCGAT GCCGATCAGA GCTGGCGCAT GGCGCTGGTC TGGATCGGCC CGCCTGCGGC TGCGCAAGTG CCACTGTTCG ACGCGTTTCT CAAGGTTCAT CCCGACGATC AGGAAATCCG CGACCAGTTG AACAAGGGTC GCCAGCAGCA TGCCAGCGGC GCTGCCTCAG GCTGGCAGCA AGACCCGCTG GTGGCGCGCG GCTTGAAGGC GCTGGAAAAA AATGATCATG TGGCGGCCGA AGAAGCCTTT GCCGCCCGCC TGAAAATCAA GGCGGACGAT GCCAACGTGC TTGGCGGCCT GGGCGTGGTG CGTCAGCAGC AGAACCGGTT GCCTGAAGCC GAACAATTGC TGACCCGCGC CACGCGCCAG CAGGGCGGTG CGCGCTGGAA AAACGCGCTG GAAAACGTAC AGCTCTGGAC CTCGCTGCAA GAGGCCCGTG ACCTGCAGGC CAAAGGGCAG ACCGGCAAGG CTCAAGCGTT GCTGGCTCAG GCGCAGCGGC AAAACCCTGA CAATATCGAC GTGCGTTTGA CCCTGGCCGA CGTGCAGGTG CAGGCCGGGC AACTGGACGC CGCGCAAGCG GGCTATCGTC AGGTACTGGC GACCCAGCGC GGTAATCCGC AGGCAATCCG CGGGCTGATC AACGTGCTGG CCCAGCGTGG TCAGGCTGAT GAAGCGTTGC GCCTGCTCGA CACATTGTCG CCAGGCGAAC AGGCCAAACT GGGCGACAGC GGTCGCTTCA AGGCGCTGCG CTCCACCCAG GTGGCGCGGC TGGCCGAGCA GCGTGGCGAT GTTCGCGCTG CCCAGGTGGC CTTGAAAGAC GCGGTGAAGA ACGACCCGGA CAATGTCTGG ACGCGTTTTG ATCTGGCGCG CCTGTACCTC AAGACCGACG AAGCGCCCAA GGCCCGCGCG CTGATCGACG AGCTGCTCAA GGCTCAGCCC AACAATATCG ATGCGCTCTA CACCAGCGCG CTGCTGTCAG TGGAAATGGG CCAGTGGCAG GACGCGCAGA CCACGTTTAC GCGCATCCCG GTTGATCAGC GCACGCCGGA CATGAAAGCG CTTGCTGACG AAGTCACCAT GACCGTGCAG ATCAATCTGG CCATCGGCAT CGCCCGGCGC GGTCAGCGCC AGGAAGCGTT GGCGCTGCTC GATCGCTTGC AACCGGTCGC CAGCGGCAGC CCGGAGCGTC AACTCACGCT GGCCAGCGCT TACATCGATG CGGGCGAGCC CGCGCGCGGT CGGGAAATGG CCCGTGCGGC CATCGCTCAG GCCCCTTTGC CGTCGGCCGA CCTGATGCTG CAATACGCCG GTCTGCTGCT CGCAGCGGGC GATGACGTGC AGGTCAATGC GATCCTGCGC AACGTGCAGG GTCAGCCGAT GAGCGTGCAG ACCCGCAAAC GTTTTGATGA CCTTTTGTAC CGCTACCGCA TTCGTCAGGC CGATCTGCTG CGTGAAGGCG GTGATCTGGC GGGCGCGTAC GACACGCTGG CACCTGCTTT GGCGCAGCGC CCGGACGACA TTCAGGCGGT GTCGGCCTTC GCCCGCATGT ACACCGCCAA TGGCGACAGC GCCCGAGCGT TCGAGCTGTA CAAGCCTTTG TTGCAGCGCC AGCCCAATGA CCCGCAAGTG TTGCTGGGCG CAGCCGATGC GGCGGTCAAA GCGCATGATT ATGGCTTTGC CGAAAAAGCC CTGAGCCAGT TCCGCAAACT GGAGCGTAAC GACCCGCAGA CCCTGACGGA GGCCGCACGT ATCTACCAAA GCATGGGGCA GACCGGCGCG GCCACCGAGT TGCTGCGCAA GGCCGTGGCC ATCGAACAGA GTGAAAAACA GCGCGCGATG GCTGTGCAGG CTGTGTCGAC CAGCACCACG TCGTCCAACC CGTTTGCGAC GGGCGGCTCA CGTAGCCTGG CGGCGGCTTC GGCTATTCCG GCTCCGGCTC AGGTGTCGCT CAGCGGTGGG AGAGCGCTTG AAACAAACAG TGCGCCTGAA ATATCTGCCC CGCGTGACAC CGCTTATCCC GGCCAGATCG CCGCACCACA ACCGCTGTCT GCCGCACGTA CGCAAAGTGT GCGCGGCAAT CCGTTCATGG CAGCCACCGA CCGCGATCAG GCCAGCAGCG CACAGCAGGC GCTCAATCGC ATTCTTGAGC AGCGCAGTGG CTTCGTCAGT CAGGGCCTGG CCGTGCGCAG CAATAACAGC GAGTCGGGTC TGAGCAAACT GACCGTGGTC GAGACCCCGC TAGAGGTCAA TTTGCCTGCC GGTGATAACC GGGTGGCCGT GCGCGTCACG CCGGTGTCGC TGAATGCTGG CAGCTTGAAG TCAGATGCAG GTGCCCGTTT TGGCGGTGGC ACCAGCGGTG CTGCCGGTTC GCAGAGCGAC AAGGGTGTCG GTCTGGCGGT GGCGTTCGAG CGCCCCGAAG AAGGCCTCAA GGCCGATATC GGCACCACGC CGATGGGTTT CAAATACACC ACGGTTGCCG GCGGCGCGAG TGTCGACCGG CCGTTGGGTA ACAACCCGGA CCTGCGCTAC GGCCTCAACG TGTCACGGCG TCCGGTGACG GACAGCGTGA CTTCGTTTGC CGGTTCCACA GACGAGCGCA GCGGCCTGTC CTGGGGCGGC GTCACGGCCA ACGGCGGGCG CGGTCAGCTC AGCTATGACG ACCAGACCAT CGGCGGTTAT GGCTACGGCT CGTGGCACAA ACTGGTTGGC AACAACGTGA AATCCAACAC CCGAGGCGAA GTGGGTGGCG GCGTTTACTG GTACCTGCGC AATGCCGAGG ACAGCAAACT GACCGCAGGC CTGAGCCTGA TGGGCATGAG CTATGACAAT GACCAGAGCT ACTTCACGTA CGGCCACGGT GGCTATTTCA GCCCGCAGAG CTTCTATGCC ATCGGCGTGC CGGTGATGTG GGCACAGCGC ACCGAGCGTT TCAGCTATCA GGTCAAGAGC TCGGTCGGGG TCCAGCACTT CAAGCAGGAC GGCGCCGAAT TCTTCCCCGA CGACAGCACG CTACAGGCCG CTTCCGCCCA GCGCTACACA GGGCAAAGCA AAACCGGAAT TGGCTACAAC CTGAGCGCGG CAGGCGAGTA CAAGCTCGAT TCCAGCCTGT TCATGGGGGC CAGTCTGGGC CTGGACAATG CCCGGGACTA TCGCCAGTTC AGCGGCGCGC TTTACCTGCG TTACATGTTC GAGGACATAA CCGGCCCGAT GGCACTGCCG GTCAGCCCTT ACCGTTCACC TTATTCCAAC TGA
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Protein sequence | MGLIGVKQNK PQQAQTYLTR LQALSPAPWQ AVQLEQDIAL GQPQNQALLD DARRLADAGE RDKATGVFRQ LFNGRLPQGT VGREYYTNLG FNNADWPEAR KGFERLMRQN PDDSILALFF AKHLARREDS RAEGIAALAR LSTHPDIAGD ADQSWRMALV WIGPPAAAQV PLFDAFLKVH PDDQEIRDQL NKGRQQHASG AASGWQQDPL VARGLKALEK NDHVAAEEAF AARLKIKADD ANVLGGLGVV RQQQNRLPEA EQLLTRATRQ QGGARWKNAL ENVQLWTSLQ EARDLQAKGQ TGKAQALLAQ AQRQNPDNID VRLTLADVQV QAGQLDAAQA GYRQVLATQR GNPQAIRGLI NVLAQRGQAD EALRLLDTLS PGEQAKLGDS GRFKALRSTQ VARLAEQRGD VRAAQVALKD AVKNDPDNVW TRFDLARLYL KTDEAPKARA LIDELLKAQP NNIDALYTSA LLSVEMGQWQ DAQTTFTRIP VDQRTPDMKA LADEVTMTVQ INLAIGIARR GQRQEALALL DRLQPVASGS PERQLTLASA YIDAGEPARG REMARAAIAQ APLPSADLML QYAGLLLAAG DDVQVNAILR NVQGQPMSVQ TRKRFDDLLY RYRIRQADLL REGGDLAGAY DTLAPALAQR PDDIQAVSAF ARMYTANGDS ARAFELYKPL LQRQPNDPQV LLGAADAAVK AHDYGFAEKA LSQFRKLERN DPQTLTEAAR IYQSMGQTGA ATELLRKAVA IEQSEKQRAM AVQAVSTSTT SSNPFATGGS RSLAAASAIP APAQVSLSGG RALETNSAPE ISAPRDTAYP GQIAAPQPLS AARTQSVRGN PFMAATDRDQ ASSAQQALNR ILEQRSGFVS QGLAVRSNNS ESGLSKLTVV ETPLEVNLPA GDNRVAVRVT PVSLNAGSLK SDAGARFGGG TSGAAGSQSD KGVGLAVAFE RPEEGLKADI GTTPMGFKYT TVAGGASVDR PLGNNPDLRY GLNVSRRPVT DSVTSFAGST DERSGLSWGG VTANGGRGQL SYDDQTIGGY GYGSWHKLVG NNVKSNTRGE VGGGVYWYLR NAEDSKLTAG LSLMGMSYDN DQSYFTYGHG GYFSPQSFYA IGVPVMWAQR TERFSYQVKS SVGVQHFKQD GAEFFPDDST LQAASAQRYT GQSKTGIGYN LSAAGEYKLD SSLFMGASLG LDNARDYRQF SGALYLRYMF EDITGPMALP VSPYRSPYSN
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