| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1028 |
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| Symbol | |
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| ID | 1182662 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 1123363 |
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| End bp | 1125618 |
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| Gene Length | 2256 bp |
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| Protein Length | 751 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637392407 |
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| Product | cyclic di-GMP binding protein WssC, putative |
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| Protein accession | NP_790864 |
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| Protein GI | 28868245 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTAAAC GGTATTTTAT CGGTGCCGAA CGGTTCGCCG TTCGCCGCTC ATGGGCTTTG
TTGGCCTGTG CGTTGTCCGT GCTCTCTACG GGGGGTGTCG CAACTGCGGC CGAAACAGCC
GCTGCAAACC AGGGTTACAG CGTGACGCTG AAACAGTTGG GGCGTAATTA CCCCATGAGC
CTGCGCGGCG TTGACGCCAC TGACAGCGTC AACTTCAACG TGCGTGCCGA TCAGGTGGTC
ACTGGCGCGA GCCTGACCTT GAGTTACAGC TACTCACCGG CGTTGCTGGC CGATCTGTCG
CAGATCAACG TCATGATCAA CGACGAAGTC GCAGCGACCC TGCCGTTGCC CAAAGAGGGC
GCTGGCAAGC CGCAGGTTCA GGTAATCGAA ATTCCGCCGC AGATGATCAC CGAGTTCAAC
CGCCTGAACC TGCAGTTTAT CGGCCACTAC ACAATGAGCT GCGAAGACCC CAAGCATTCC
AGCCTGTGGG CGCGGATCAA CAACGACACG CGTCTGGACA TCCGTGTGAC GCCGTTCGCG
CTGCCCAACG ATCTGGCCAT TTTGCCGCTG CCGTTCTTCG ACCGTCGCGA TGACCGTGAC
GTAAACCTGC CGGTGGTGAT GGGCGCGGCA CCCGACAACG CCACGCTGGA AGCCGCCGGT
GCGCTTGCGT CGTGGATCGG TGCGGCCAAG ACCCGCTCGC GGATGGCCAG CTTCCCGGCG
CACTTCAACG AGCTGCCAGC CAAGGGCAAC GCGCTGGTGT TGCTCAAGGG CGACGGCCCG
CTGCAACTGG GCGCTTTGAC CATGCCTGCG CCAAAAGGCC CGACCCTGAC GATGGTGACG
CACCCCAACG ACCCGAACGG CAAGTTGCTG GTGATCACGG GACGTAATTC CGCCGAGCTG
AAAAAAGCGG TCAACGCGCT GGTGGTCGGC GGGCAGAGCC TGGTCGGCAG CAGCGCGCTG
ATCGAACGGG TCGACATGCT TGCGCCGCGT AAGCCGTATG ACGCGCCGAA CTGGCTGCCG
AGTGATCGGC CGATCAAGCT TGGCGAGCTG ATGCCTGCCA ACAAACTGAA TGTGTCCGGT
TACGATCCGG GTGACATCAC TGTGCCGCTG AACCTGCCGC CAGACCTGTT CAGCTGGCGC
GAAGACGGTG TGCCGCTGAA CCTCAAATAC CGCTACACGC CGCAGGAGCG CTCCAACAAT
TCGTCGATCA TGGTCAGCCT CAACGACACC CTGATCAAGG CCGAGCCACT GCCTTCGATC
GATAACCTGA GCAATTCGAT CCTGGCCCGG CTGACCGGTG GCAACGACAC AGTCAGCCGT
GAAGCGCACG TGTACCTGCC GCTCAATTCG GTGGCGCTGC AATCGCGTCT GCAACTGCGT
TACATGTTCG ATTACCTCAA ACAGGGCGAA TGTGGCGACA TCATCATCGA CAACATGCGC
GGCAGCATCG ACCCGGAATC GACTCTGGAT TTCAGCGGTT ACGACCACTT TATGGCGATG
CCCAACCTGG GCGTGTTCAA GGACTCGGGT TTCCCGTTCA CGCGTCTGGC TGACCTGTCG
CAAACGGCGG TAGTGCTGGC TGACCAGCCG AGTACCGAAG ACGTCAGCGC GTACCTGAAC
GTGCTGGGCC GTTTTGGTGA GTCCACCGGT TACCCGGCGA CCGGCGTCAC AGTGATGCAG
GCCGCACAGA TCGCCAGCGC CGCCGACAAG GACATTCTGG TCATGTCTTC GGGGCCCGAT
CAGCCGTTGC TCAACCTGTG GGCCAACCGC CTGCCGACCT CCGGCAACGG TCAGCAGCAG
GGTTTCGAGC TTTCCGATCT GGCGTTCCGC CTGCGTGACT GGATGAGCCC GGACCCGGAT
GAAAACCTGC GTCGGGCGCG GGTGGCGATG GCGTTCTCCA GCGATGCGCG CAGCACCTTT
CTGACCGGCT TCGAATCGCC GCTGCACAAA GGCCGCAGCG TGGTGCTGAT CTCCAGTGGC
CAACCCGGCG GCATGAGCGA CGTGGCCCGT GCGCTGAGCA ACAGCGACAA GGTGCAGGGC
AGTCTGGTGG TGGTGCGTGG CGATTCCGTC GAAGCACTGG TTGCCGAACA GAATTACTAC
GTCGGTGATC TTGGGCCGAT CAAATACGTG CAGTGGCTGA TGTCGCGCAA CGTGCTGTGG
CTGTTGCTGG TGGTCGTCGT GGGTGTGGTG CTGGTCACCG GGGTGGCTTA CCTGACCCTG
CGTTCGCTTG CCAAACGCCG ACTGGAGCAT GAATAA
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| Protein sequence | MTKRYFIGAE RFAVRRSWAL LACALSVLST GGVATAAETA AANQGYSVTL KQLGRNYPMS
LRGVDATDSV NFNVRADQVV TGASLTLSYS YSPALLADLS QINVMINDEV AATLPLPKEG
AGKPQVQVIE IPPQMITEFN RLNLQFIGHY TMSCEDPKHS SLWARINNDT RLDIRVTPFA
LPNDLAILPL PFFDRRDDRD VNLPVVMGAA PDNATLEAAG ALASWIGAAK TRSRMASFPA
HFNELPAKGN ALVLLKGDGP LQLGALTMPA PKGPTLTMVT HPNDPNGKLL VITGRNSAEL
KKAVNALVVG GQSLVGSSAL IERVDMLAPR KPYDAPNWLP SDRPIKLGEL MPANKLNVSG
YDPGDITVPL NLPPDLFSWR EDGVPLNLKY RYTPQERSNN SSIMVSLNDT LIKAEPLPSI
DNLSNSILAR LTGGNDTVSR EAHVYLPLNS VALQSRLQLR YMFDYLKQGE CGDIIIDNMR
GSIDPESTLD FSGYDHFMAM PNLGVFKDSG FPFTRLADLS QTAVVLADQP STEDVSAYLN
VLGRFGESTG YPATGVTVMQ AAQIASAADK DILVMSSGPD QPLLNLWANR LPTSGNGQQQ
GFELSDLAFR LRDWMSPDPD ENLRRARVAM AFSSDARSTF LTGFESPLHK GRSVVLISSG
QPGGMSDVAR ALSNSDKVQG SLVVVRGDSV EALVAEQNYY VGDLGPIKYV QWLMSRNVLW
LLLVVVVGVV LVTGVAYLTL RSLAKRRLEH E
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