| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1024 |
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| Symbol | |
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| ID | 1182658 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 1117166 |
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| End bp | 1118434 |
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| Gene Length | 1269 bp |
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| Protein Length | 422 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637392403 |
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| Product | phospholipase D family protein |
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| Protein accession | NP_790860 |
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| Protein GI | 28868241 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1502] Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCACTTCT CTATCTGGTT TCGCTCGACG TCCATACGCT ACCGCAGCCT GATTGCCGCA
TTGCTGCTCA GCAGTCCGGT TGCCTATGCA GATTTCGCCA TTCCCGGTTT CGACCTGGTG
CACACCGTGC CCGTCGGGAC CGACCTGCAA ACCCCGGACC TGCGAGCGCC TGGCGATGTC
TGGCGCGAGC TGTTCGATGG GGCTCGCGAG CGTATCGATA TCGAACAGTT TTATGTGGCA
GATCAGCCAG GCTCGGTGAT GGGCAAGGTG CTTGAAAGCC TGACCGCAGC GGGGCAGCGC
GGGGTAAACA TCCGTTTTCT GCTGGAAGAG AAAGGCTTGA AGCTTTCCGA TCCAGAGACC
CTTGAACGCT TGCGGGCGAT CCCCAACCTC ACCTTGCGGG TGCTGCCTTA CGCCAGGCTG
ACCGGCAGTG GCATCATCCA CGCCAAGTTT TTCGTGGTGG ATGGCAAGCA GGCATTTATC
GGCAGTCAGA ACTTCGATTG GCGTTCACTG GAACATATTC ACGAAACCGG TTTGCGTATT
GACGAGCCCA CGGTCGTGCG ACAGACGCAG GCTGTGTTCG ATCAGGACTG GCTTGCCCAG
GCGGCCATTG CCGACGGCAA ACCTGTGCCG GTTGCTGTTT CTGGTGCGCC GCCTGCCAGC
GGCGCATCGC CCGGTGGCAA TTATCTGGTC GCCAGCCCAC AGCGCTATAA CCCGTCGGGC
GTGCGCGACT CCGAGACCGA ACTGCCGCGT TTGCTGGCGC AAGCCAAAAG CGAGGTTCGT
GTCCAGTTGC TGGACTACGC ACCGCTGTCC TATGGGCCTG ATAAAACCCG GCCGTATTAC
GCGGTCATCG ACAACGCCCT GCGCAGCGCC GCCGCCCGTG GCGTGTCGGT CAAACTCATG
GTTTCAGACT GGAACACCGG CATGCCCGAG GTCGCCTATC TGAAAAGTCT GGCTCTGGTG
CCCAACATAC AAATACGCAT CGTGACGTTG CCAATGGCCG CTCAGGGTTT CATCCCCTAC
GCACGGGTGA TCCACAGCAA AACCATGGCG ATTGATGACC AGGTCGCCTG GGTCGGCACC
AGCAACTGGC TCGGCGGCTA CCTCGACAAC TCGCGCAACC TGGAAGTGGT GATGCACGAC
AGCACGATGG CCAGGCGCAT CGGCCAGTTG CATGCACAGC TCTGGGAGGG GCCGTATGCC
AAGCCCATCG ACATCAATCG CGACTACCCG CAACCGCATC CGGGAAGTTT GAATGCAGCT
CCCCACTAG
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| Protein sequence | MHFSIWFRST SIRYRSLIAA LLLSSPVAYA DFAIPGFDLV HTVPVGTDLQ TPDLRAPGDV
WRELFDGARE RIDIEQFYVA DQPGSVMGKV LESLTAAGQR GVNIRFLLEE KGLKLSDPET
LERLRAIPNL TLRVLPYARL TGSGIIHAKF FVVDGKQAFI GSQNFDWRSL EHIHETGLRI
DEPTVVRQTQ AVFDQDWLAQ AAIADGKPVP VAVSGAPPAS GASPGGNYLV ASPQRYNPSG
VRDSETELPR LLAQAKSEVR VQLLDYAPLS YGPDKTRPYY AVIDNALRSA AARGVSVKLM
VSDWNTGMPE VAYLKSLALV PNIQIRIVTL PMAAQGFIPY ARVIHSKTMA IDDQVAWVGT
SNWLGGYLDN SRNLEVVMHD STMARRIGQL HAQLWEGPYA KPIDINRDYP QPHPGSLNAA
PH
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