| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0996 |
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| Symbol | |
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| ID | 1182630 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 1086926 |
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| End bp | 1087585 |
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| Gene Length | 660 bp |
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| Protein Length | 219 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637392378 |
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| Product | HD domain protein |
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| Protein accession | NP_790835 |
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| Protein GI | 28868216 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1418] Predicted HD superfamily hydrolase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.801042 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGCCG CAAGCTTCGC CCCGTTTCAG GATCTCGCCA ACCTGCTGAT CCCTTACACG
CATGCCGAGA AGATCGACGG CTCGCACGAC GTCTCACATT TGCTGCGGGT GTGGAAGAAC
GTCTGCGCCA TACGTGACCG TGAAGGCGGC GATGCACGTG TGCTGATGGC CGCCACGCTG
CTGCACGATT GCGTATCGGT CGAAAAAGAC TCGCCGTTTC GCGCCGGTGC CTCGCGACTG
GCGGCGGCAA GGGCCCGCGA ACTGCTGGGC GACATGGGCT GGGATGAGGA AAGCATCGCC
TCGGTTGCCC ACGCTGTCGA GGCGCACAGT TTTTCGGCGG CGATAACCCC GGTGTCGCTG
GAAGCAAAAA TACTGCAAGA CGCCGACCGG CTGGATTCAC TGGGCATGAT TGGTGTGGCG
CGAACCTTTT ATGTCTCCGG CCGGATGGGC AAATACCTGT ACGAGCCCAA TGATCCGCAT
GCCAGCCAGC GCCCGTATGA CGACAAGCGC TTTGCCGTCG ATCACTTTCA TACCAAGCTG
CTGCACCTTG CCGACGGCTT TCAGACCCGC ACAGGCACGC AGATGGCGAA GGTCAGGCAC
GACCGGTTGA AACGCTTTCT GGATGAATTG ATGGAAGAAA TCGACGCGTC CCGGCCCTGA
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| Protein sequence | MAAASFAPFQ DLANLLIPYT HAEKIDGSHD VSHLLRVWKN VCAIRDREGG DARVLMAATL
LHDCVSVEKD SPFRAGASRL AAARARELLG DMGWDEESIA SVAHAVEAHS FSAAITPVSL
EAKILQDADR LDSLGMIGVA RTFYVSGRMG KYLYEPNDPH ASQRPYDDKR FAVDHFHTKL
LHLADGFQTR TGTQMAKVRH DRLKRFLDEL MEEIDASRP
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