Gene PSPTO_0975 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_0975 
Symbol 
ID1182604 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp1059244 
End bp1059588 
Gene Length345 bp 
Protein Length114 aa 
Translation table11 
GC content59% 
IMG OID637392352 
Productpentapeptide repeat domain protein 
Protein accessionNP_790814 
Protein GI28868195 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000613608 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCAGC CCAAACAGAT CGACTCACCC CTTTATATGC TGCTGCGCCA GGATGATGTC 
GAAGGTTTCA ATCAGGAAAA ACCGCGAACC GGCACGATCG ACATGACCGG AGGCGACTTT
CGAGGGCTGG ACCTGCGTGC GCTGGACACA ACAGGTATCG ATTTCACCGA CGCCTACTTT
CGCTCCGCCG ACCTTCGCGG CCTGGACTTG CGCCATATCC CGATGGAAGG TGCAAGCATC
GCCCACGCAC AGATCTCCGG CGTATTCTTC CCCGCCGAGC TCTCGGCTGA CGAGATACTG
ATGTCGGTAA ACTTCGGGAC GCGCCTGCGC TATCGCAGCC ACTGA
 
Protein sequence
MSQPKQIDSP LYMLLRQDDV EGFNQEKPRT GTIDMTGGDF RGLDLRALDT TGIDFTDAYF 
RSADLRGLDL RHIPMEGASI AHAQISGVFF PAELSADEIL MSVNFGTRLR YRSH