| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0939 |
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| Symbol | |
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| ID | 1182568 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 1017283 |
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| End bp | 1017960 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637392316 |
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| Product | HAD-superfamily hydrolase |
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| Protein accession | NP_790778 |
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| Protein GI | 28868159 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0560] Phosphoserine phosphatase |
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| TIGRFAM ID | [TIGR01488] Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like
[TIGR01490] HAD-superfamily subfamily IB hydrolase, TIGR01490 |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGAACAAC GCTTGCTGGC GGTGTTCGAT TTCGATGGGA CGATTACCCG GCACGACAGC
TTTGTTCCGT TTCTCAAGTT CGCCTTCGGG CAACGTGTTT TCTCCGTACG CATGGCGCGG
CTGGTGCTGC CCAGCCTTGG CTACCTGACC AAGCGCCTGA GCCGTGACGA ACTCAAAGGC
CGGCTGATCA AGGCTTTTCT GAGCGGCGTT GAAGTGCAGT GGCTGCAACA GAAGGCCGAA
GCCTTCTGCC ATTCGCACTG GAAACGCCTG ATGCGCCCTG CTGCGCTTGA GTCCATCGCG
GCTGAAATCG AAAAGGGTGC CATTGTCACG CTTTGTTCAG CATCGCCTGC TATGGTCCTG
CAACCCTTCG CTGATCGCTT GAAAGTGGAG CTGATCGGCA CCAATCTGGA AGTCATCGAC
GGCAAGTTGA CCGGCTTGAT CGAGGGCAGT AATTGCCGTT GCGACTCCAA GGTGGCGCGT
CTTGAAAGCG TTTACGGGCC GCTGACGCAG TTCCGGGTTC GCGCCTGGGG CGACACGCGA
GGTGATCACG AATTGCTTGC CGCTGCTCAG GATGCGCACT GGCGATTGTT CCATCCGACG
TGGCGTCGAG GCCGTTATAA AGGCCCCGTT AACGCCAAGT TACACAATCC TGATGGCAAA
GACGGGCCAA CACGGTAA
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| Protein sequence | MEQRLLAVFD FDGTITRHDS FVPFLKFAFG QRVFSVRMAR LVLPSLGYLT KRLSRDELKG
RLIKAFLSGV EVQWLQQKAE AFCHSHWKRL MRPAALESIA AEIEKGAIVT LCSASPAMVL
QPFADRLKVE LIGTNLEVID GKLTGLIEGS NCRCDSKVAR LESVYGPLTQ FRVRAWGDTR
GDHELLAAAQ DAHWRLFHPT WRRGRYKGPV NAKLHNPDGK DGPTR
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