Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_0911 |
Symbol | cheW-1 |
ID | 1182540 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 992156 |
End bp | 992695 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637392288 |
Product | chemotaxis protein CheW |
Protein accession | NP_790750 |
Protein GI | 28868131 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0835] Chemotaxis signal transduction protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGCTCAT TGGTCACGAC TCGGCAGGCC GTAACGGCGG TCGAAGAAGA GGCGCAATAC CTGACTTTCA TGCTCGGCGG CGAGATGTTT GCCATCGGCA TTCTGGGCAT CAAGGAGATC ATCGAATACG GCAGCCTGAC TGTCGTGCCG ATGATGCCCG CCTTCGTGCG CGGCGTGATC AACCTGCGCG GCGCGGTGGT GCCCGTGGTT GATCTGTCGG CGCGTTTCGG GCGGCAGAAC TCGGAAATCA CCCGGCGTTC GTGCGTCATC ATCATTGAGG CCAGCACCGA AGACGGCCAG CCGCAGGACA TCGGGTTGCT GGTGGACAAT GTTTCGGCGG TGCTGGAGAT ACCCGCTTCG CAGATCGAGC CGCCGCCGAA TTTCGGCGCG CGGATTCGTG CCGACTTCAT CAGTGGCATG GCCAAGGTCG ATGGTCATTT CGTGATCGTG CTGGAAGTCG AGCGCGTGCT GTCCATCGAT GAGATGTCCA GCCTTGCCGA GGCAGGTCAG ACGCCAGCGC TCGACGCCGA CGCGCACTGA
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Protein sequence | MGSLVTTRQA VTAVEEEAQY LTFMLGGEMF AIGILGIKEI IEYGSLTVVP MMPAFVRGVI NLRGAVVPVV DLSARFGRQN SEITRRSCVI IIEASTEDGQ PQDIGLLVDN VSAVLEIPAS QIEPPPNFGA RIRADFISGM AKVDGHFVIV LEVERVLSID EMSSLAEAGQ TPALDADAH
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