| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0862 |
|---|
| Symbol | |
|---|
| ID | 1182491 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004578 |
|---|
| Strand | - |
|---|
| Start bp | 933947 |
|---|
| End bp | 934870 |
|---|
| Gene Length | 924 bp |
|---|
| Protein Length | 307 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637392240 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_790702 |
|---|
| Protein GI | 28868083 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGGATTT TGCGTGTACT CACGGGTTCG GCATTACTGA TGGTGTTGGT CGGCACTACA
CAAATCGCCT CGGCGGTGGA GATTCTCCGC TGGGAGCGTT TGCCACTGGC CATTCCACTG
CGCATCAATC AGGAACGCAT CGTCTTCGTC GATCAGAATG TCCGAGTCGG GCTTCCGAGG
TCTTTGACAG ACAAGCTGCG GGTGCAGAGT ACGGGCGGCG CGATCTACCT GTTTGCCAAG
GATGCGATCG AGCCGACACG TCTCCAGCTG CAGAACGCCA AGACCGGCGA GATCATTCTG
GTGGATATCG CTGCTACAGA GGCCCCTATG GATCAACCGG CGCTGGAGCC GGTGAAGATT
GTGGAAGGTG AAACATCATC CGCACGCTAT GGAGGGGCTG CTACAGCACG CTCAGCCAAG
GCCACGACAA AGAGCATGGA TTCAACCAGC CGGTCGAACG ATGAAGACGA TGAGCCAGAG
GAAGTAGTCA AGCGAGAAAC GCCTGTCCCA GTGGTTCTGA CACGCTATGC GGCCCAGATG
CTCTATGCGC CGTTGCGCAC CGTTGAGCCT GTAGACGGCA TCGCCCAGGT GAAGGTTGAG
CGCAGCCTTG ATCTGGCCAC CCTGCTTCCC ACTCTACCTG TGAAGTCCAC ACCCTTGGGC
GCATGGCGTC TGGATGATTT TTGGGTGACA GCCGTGAAGT TGCAGAATCA GACGGCGCAG
CGCATCACGC TCGACCCTCG GGAACTGATG GGTGAGTTCG TGACAGCGGC CTTTCAACAT
CCCTATCTCG GGTCGCAAGG TAATGCCAGT GACACTACGA CCTTGTACCT GGTCACGCGG
GGACACGGGC TGACACAAGC AACCGTGTTC TCCGCCGCCC CAGCAGATCC GCGTGCAACC
CGGGGAGCCA AGCATGAAGA GTAA
|
|---|
| Protein sequence | MRILRVLTGS ALLMVLVGTT QIASAVEILR WERLPLAIPL RINQERIVFV DQNVRVGLPR
SLTDKLRVQS TGGAIYLFAK DAIEPTRLQL QNAKTGEIIL VDIAATEAPM DQPALEPVKI
VEGETSSARY GGAATARSAK ATTKSMDSTS RSNDEDDEPE EVVKRETPVP VVLTRYAAQM
LYAPLRTVEP VDGIAQVKVE RSLDLATLLP TLPVKSTPLG AWRLDDFWVT AVKLQNQTAQ
RITLDPRELM GEFVTAAFQH PYLGSQGNAS DTTTLYLVTR GHGLTQATVF SAAPADPRAT
RGAKHEE
|
|---|
| |