Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_0857 |
Symbol | |
ID | 1182486 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 928074 |
End bp | 928778 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637392235 |
Product | hypothetical protein |
Protein accession | NP_790697 |
Protein GI | 28868078 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1651] Protein-disulfide isomerase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.473961 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAGCGAC CCACACGTCG TCAGATCCTA TACGGCATCG GTGCGGTAGC CTTGGCAATT CTGGCTTTTG AATGCCTGCC AGATGTCAGG CAGGGCATGC AAATGCTCAA CACCGCCGAC AGCATCAGCC AGACATCCAA ACAGACGAAG CATAATGGCG CGTGGGTTTA CGGGAGCAGC AGTGCCAGAT TCACCATCGT CGAGTATGCA GATCTGGAAT GCCCGTACTG CAAGGATTAT TTCCCACAGC TCAAAGCATG GGTTGATCAG CATCCAGACG TGAACCTGCA GTGGCACCAT CTCCCTCTTC CCATGCACGA GCCGGCCGCG AGCTATGAAG CTCGCTGGGC TGAGTGCGCA GGGATCGAGC GAGGCAATGA CGTGTTCTGG CTCGCCGTCG AACTCATTTA TCAGCGCACT CGGTCGAATG GTGCTGGAAC TGCTGGCAAT CCGCAGATCC CGGGGCTTGA GGATCGCCAG CACTTCATCG ATAACTGCGC GTCGAGCAAC CCGGCTGCCC GACAGGCTGT TGTTAGCCAG GCACACAAGG CCAGCCTAGG CGGCATCACC GCCACACCGA CGTTGGTCAT CAAGGACAAG CACTCTGGCC GCACGATCAA GCTGCAGGGA GCACCTGACG GTAACGTGCT GCTTTCCGCA ATCGACTGGA TGGCCAGCAC GGACTCGAAC AGCAGCGATA AGTGA
|
Protein sequence | MKRPTRRQIL YGIGAVALAI LAFECLPDVR QGMQMLNTAD SISQTSKQTK HNGAWVYGSS SARFTIVEYA DLECPYCKDY FPQLKAWVDQ HPDVNLQWHH LPLPMHEPAA SYEARWAECA GIERGNDVFW LAVELIYQRT RSNGAGTAGN PQIPGLEDRQ HFIDNCASSN PAARQAVVSQ AHKASLGGIT ATPTLVIKDK HSGRTIKLQG APDGNVLLSA IDWMASTDSN SSDK
|
| |