Gene PSPTO_0857 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_0857 
Symbol 
ID1182486 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp928074 
End bp928778 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content58% 
IMG OID637392235 
Producthypothetical protein 
Protein accessionNP_790697 
Protein GI28868078 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1651] Protein-disulfide isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.473961 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCGAC CCACACGTCG TCAGATCCTA TACGGCATCG GTGCGGTAGC CTTGGCAATT 
CTGGCTTTTG AATGCCTGCC AGATGTCAGG CAGGGCATGC AAATGCTCAA CACCGCCGAC
AGCATCAGCC AGACATCCAA ACAGACGAAG CATAATGGCG CGTGGGTTTA CGGGAGCAGC
AGTGCCAGAT TCACCATCGT CGAGTATGCA GATCTGGAAT GCCCGTACTG CAAGGATTAT
TTCCCACAGC TCAAAGCATG GGTTGATCAG CATCCAGACG TGAACCTGCA GTGGCACCAT
CTCCCTCTTC CCATGCACGA GCCGGCCGCG AGCTATGAAG CTCGCTGGGC TGAGTGCGCA
GGGATCGAGC GAGGCAATGA CGTGTTCTGG CTCGCCGTCG AACTCATTTA TCAGCGCACT
CGGTCGAATG GTGCTGGAAC TGCTGGCAAT CCGCAGATCC CGGGGCTTGA GGATCGCCAG
CACTTCATCG ATAACTGCGC GTCGAGCAAC CCGGCTGCCC GACAGGCTGT TGTTAGCCAG
GCACACAAGG CCAGCCTAGG CGGCATCACC GCCACACCGA CGTTGGTCAT CAAGGACAAG
CACTCTGGCC GCACGATCAA GCTGCAGGGA GCACCTGACG GTAACGTGCT GCTTTCCGCA
ATCGACTGGA TGGCCAGCAC GGACTCGAAC AGCAGCGATA AGTGA
 
Protein sequence
MKRPTRRQIL YGIGAVALAI LAFECLPDVR QGMQMLNTAD SISQTSKQTK HNGAWVYGSS 
SARFTIVEYA DLECPYCKDY FPQLKAWVDQ HPDVNLQWHH LPLPMHEPAA SYEARWAECA
GIERGNDVFW LAVELIYQRT RSNGAGTAGN PQIPGLEDRQ HFIDNCASSN PAARQAVVSQ
AHKASLGGIT ATPTLVIKDK HSGRTIKLQG APDGNVLLSA IDWMASTDSN SSDK