Gene PSPTO_0822 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_0822 
Symbol 
ID1182447 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand- 
Start bp888496 
End bp889113 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content56% 
IMG OID637392202 
Producttranscriptional regulator, TetR family 
Protein accessionNP_790669 
Protein GI28868050 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.752802 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAAAA CCATCAGCAA TCCCGCAGCA GGCCGTGGTC CGGTGGACCA TGAGATTCGT 
GATCAGATCG TGATTGCGGC CACAGAACAT TTCAGTCAAT ACGGTTACGG CAAGACCACT 
GTGTCCGATC TGGCCAGGGC TATCGGGTTT TCCAAGGCGT ACATCTACAA GTTCTTCGAG 
TCCAAGCAGG CCATCGGCGA GATGATCTGC GCCAACTGTC TGAGTGAAAT CGAAGCAGAG 
GTCAGAGCAG CAGTCAACGA AACCGACCGC CCGCCCGAAA AGCTGCGACG CATGTTCAAA 
TCAGTCGTCG AAGCCAGCAT TCGCCTGTTC TCGCATGACC GCAAGCTGTA CGAGATTGCT 
ACGTCGGCAG CGACCGAGCG CTGGCAGGCG ACGTTGATTT ACGAGGACAA CCTCAAGGCC 
ATGCTTCAGA ACATTCTGCA GGAAGGTCGG CAAACCGGCG ACTTCGAGCG TAAGACGCCC 
CTTGATGAAA CCGTCATGGC GATCTATCTG GTAATGCGTC CCTACATCAA CCCGCTGCTC 
CTGCAACACA CCTTCGATCA CACCGACGAA GGCCCGAGTC AGCTATCCAG TCTGGTGCTG 
CGCAGCCTGT CGCCGTGA
 
Protein sequence
MNKTISNPAA GRGPVDHEIR DQIVIAATEH FSQYGYGKTT VSDLARAIGF SKAYIYKFFE 
SKQAIGEMIC ANCLSEIEAE VRAAVNETDR PPEKLRRMFK SVVEASIRLF SHDRKLYEIA 
TSAATERWQA TLIYEDNLKA MLQNILQEGR QTGDFERKTP LDETVMAIYL VMRPYINPLL 
LQHTFDHTDE GPSQLSSLVL RSLSP