| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0817 |
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| Symbol | |
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| ID | 1182442 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 881733 |
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| End bp | 882836 |
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| Gene Length | 1104 bp |
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| Protein Length | 367 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637392197 |
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| Product | oxidoreductase, FAD-binding protein |
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| Protein accession | NP_790664 |
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| Protein GI | 28868045 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | [TIGR02352] glycine oxidase ThiO |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCAAGC AAAAAATAGT CATTGTCGGC GGCGGTGTCA TAGGTCTGCT GACCGCCTTC
AATCTCGCCT CCGAGCAGGT CAACGTCGTA TTGCTGGATC GCTCGGGTGT CGGGCAAGAG
TCCTCCTGGG CGGGCGGCGG GATTGTTTCG CCGCTTTATC CGTGGCGCTA CAGCCCGGCA
GTCACCGCGT TGGCGCACTG GTCGCAGGAC TTCTACCCGC ACCTCGCCGA GCGTCTGTTT
GCGCAAACCG GCATTGACCC CGAAGTTCAC AAGACCGGCC TGTACTGGCT CGACCTCGAC
GATGAACAGG CCGCGCTCGA ATGGGCTGCG CGTGAGAACC GGCCATTGAG CAGTGTCGAT
ATCTCGGCAG TGAACGATGC GGTGCCGGCG CTGGGGGAGG GGTACTCGCG GGCGATCCAC
ATGGCCGACG TGGCGAATGT GCGCAACCCC AGGCTGGTCA AGTCGCTCAA AGCCGCGCTG
CTGGCGATGC CCAACGTGGA CATTCGCGAG CAGTGCAACG TCAGCGGTTT TGTGCGCGAA
GGCAGCAGGG TTTCAGGCGT GAGCACGCCG TCAGGCGATG TCACCGGTGA CCGGGTGATT
CTGACGGCGG GAGCTTGGAG CGGTGACTTG CTCAAAACCC TCGGCCTGGA CCTGCCGGTC
GAGCCGGTGA AAGGGCAGAT GATCCTCTAC AAATGCGCAT CTGACTTCCT TTCCAGCATG
GTCCTGGCCA AAGGGCGCTA CGCAATCCCG CGCCGCGATG GCCACATTCT GATCGGCAGC
ACGCTGGAGC ATGAAGGGTT CGACAAGACC ACCACGCAGG CCGCGCTGGA AAGTCTCAAG
GCGTCGGCCA TCGAATTGAT TCCCGAACTG GCCAACGCCG AACCCATCGC CCAATGGGCC
GGGCTGCGTC CGGGCTCGCC CGAAGGCATT CCCTTCATCG GACCGCTGGC TGGCTTCGAT
GGGCTGTGGC TCAACTGCGG CCACTACCGC AACGGCCTGG TGCTGGCACC TGCTTCGTGC
CAGCTACTCA CCGACTTGCT GCTGGGCCGC AAACCGATCA TCGATCCTGC ACCTTACTCA
CCGTTAGGCC GTCTGCATTT TTGA
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| Protein sequence | MPKQKIVIVG GGVIGLLTAF NLASEQVNVV LLDRSGVGQE SSWAGGGIVS PLYPWRYSPA
VTALAHWSQD FYPHLAERLF AQTGIDPEVH KTGLYWLDLD DEQAALEWAA RENRPLSSVD
ISAVNDAVPA LGEGYSRAIH MADVANVRNP RLVKSLKAAL LAMPNVDIRE QCNVSGFVRE
GSRVSGVSTP SGDVTGDRVI LTAGAWSGDL LKTLGLDLPV EPVKGQMILY KCASDFLSSM
VLAKGRYAIP RRDGHILIGS TLEHEGFDKT TTQAALESLK ASAIELIPEL ANAEPIAQWA
GLRPGSPEGI PFIGPLAGFD GLWLNCGHYR NGLVLAPASC QLLTDLLLGR KPIIDPAPYS
PLGRLHF
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