| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0813 |
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| Symbol | |
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| ID | 1182438 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 876876 |
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| End bp | 877583 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 637392193 |
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| Product | hypothetical protein |
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| Protein accession | NP_790660 |
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| Protein GI | 28868041 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4966] Tfp pilus assembly protein PilW |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAAAGC TTTCCAGAGG CTTCGGGCTG GTCGAAATCA TGGTGGCGCT GGTGCTTGGG
CTGGTGGTCA GCCTGGGCAT CATCCAGATA TTCACCGCTT CCAGAGCCAC TTATCAGAGC
CAGAACGCAG CTGCCCGGAT GCAGGAAGAC GCCCGGTTCA TCTTGAGCAA ACTGATTCAG
GAAATCAGGA TGACGGGTAT GTATGGTTGC CTGAGTTTCA GCAATTACAC GCCTGTATCA
CCGGCTATCC CTTGGCCGGT CGCACTGGAT ACTCCGATTC TTTGGGATAA TCCGAACAAG
ACACTCACTC TTGTGACCAC TGATGTGGGC ACAACGGGGA GTCCCCCGAC CTGGACCATT
GTTTCGGACT GTCAAAACAC TACAAATCTC TACGCCAACA GTCGGGCACC TGCTGCGGGG
GAGACCGCTT TTCCGCTGCG GCAGCTGGTT TACAAGCTTA CCGGAACAAA CTTGACCATT
CAGTTCGGTA CGGGCGGCGA TGTACAGCCG TTATTGCAGA ACGTCGCGGA TTTTTCTGTT
TCCTTCGGGA TGGCAGGGAA TCCGATGTCC TATACCTCGG CTGTGACCAA GGCTAATGCC
GGTGACATAC GTAGCGTGCG GATCAGTCTG ACACTGCAGG ATGGGCAGAA TGGTCTGGTC
AAGAGTCAGC AGTACAACGT CGTTGCTTAT CTGCGTAATC GCTTTTGA
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| Protein sequence | MRKLSRGFGL VEIMVALVLG LVVSLGIIQI FTASRATYQS QNAAARMQED ARFILSKLIQ
EIRMTGMYGC LSFSNYTPVS PAIPWPVALD TPILWDNPNK TLTLVTTDVG TTGSPPTWTI
VSDCQNTTNL YANSRAPAAG ETAFPLRQLV YKLTGTNLTI QFGTGGDVQP LLQNVADFSV
SFGMAGNPMS YTSAVTKANA GDIRSVRISL TLQDGQNGLV KSQQYNVVAY LRNRF
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