Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_0739 |
Symbol | |
ID | 1182359 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 786811 |
End bp | 787449 |
Gene Length | 639 bp |
Protein Length | 212 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637392114 |
Product | lipoprotein, putative |
Protein accession | NP_790586 |
Protein GI | 28867967 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCTACC GTGCTGCCTC GTTTGTCCTG TTGCTCGGCC TGAGCGTTAT CGGGCTGAGC GCCTGCCAGA GCGATAACCC TTACGTGGCC AGCTCGCTGC CCATGCCGCC TGCGCCGCCG CAGGCAGCCA AAACGCTGGA CTTGAGCGCT TATCCTGCGC CGCCACGCGA CTATGGCAAG TACCGGACCT GGGGCTGGCT CAACGGCCAA CTGCCGCCGG GTACAGCCTG GGTGGACTCG GCGCAAGTGG TCGAAGCGTT GAGCAATGGT CTGGATCAGC GCGGCTTGCG CCCGGCTCGT AGTAATCAGC CTGCCGACCT TTACGTAAGC GCCACTACCC GGCAGGAAAC CCGGCTGCGC CAGGTGCGTG AGGATTACGA TCCGTATTAT GGAGGCGGCT CGGGCTATGG CCGTTACGAT GGCTATCGAC CCGGTTACGG CGGCTACGCC AGCGTACCGG TGGTGCGCAC TTATCAGGAA AACGTGATGG TGGTGCAGAT CAACCTGATT GATGCGCGCA CCGGCCAGCC GGTCTGGAGC GCCAGTGCCG ATGCACGCGC CAGCAACAAT CTGGCAGACC GCAGCAGCGC ATTGCGTCAG GCCGTGCAAC AGGCGCTGAG CGCTTATCCT CCTTCTTAG
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Protein sequence | MTYRAASFVL LLGLSVIGLS ACQSDNPYVA SSLPMPPAPP QAAKTLDLSA YPAPPRDYGK YRTWGWLNGQ LPPGTAWVDS AQVVEALSNG LDQRGLRPAR SNQPADLYVS ATTRQETRLR QVREDYDPYY GGGSGYGRYD GYRPGYGGYA SVPVVRTYQE NVMVVQINLI DARTGQPVWS ASADARASNN LADRSSALRQ AVQQALSAYP PS
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