| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0701 |
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| Symbol | metC-1 |
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| ID | 1182321 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 753852 |
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| End bp | 755018 |
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| Gene Length | 1167 bp |
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| Protein Length | 388 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637392076 |
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| Product | cystathionine beta-lyase |
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| Protein accession | NP_790548 |
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| Protein GI | 28867929 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
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| TIGRFAM ID | [TIGR01324] cystathionine beta-lyase, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGCACA GCAAAGACCC TCGCGCCCAC ACTGCCCTGT CGCAACGTGG TCGCAGCGCC
AGTAGCGGCC CGGGGCTTGC GGTCAATCCG CCGGTTGTGC GCCTCAGCAC GGTAGTGTTC
GACAGCCTGG AAAGCTTGCG CGAAGCCGAG GTTCGCACGG CCGGGCCGGA GCGTTCGCTG
ACTTACGGGG CCAATGGCAA CCCGACTGCG TTTGCCTTGC AGGACCTGAT CTCTGAGCTT
GAAGGCGCGC ACGGCACGTG TCTTTACCCG ACCGGGCTTG CCGCCGTCGC ACAGATGTTT
CAATCCTTTC TGCGCCCCGG CGATCACGTA CTGCTCACCG AATCGGTCTA TGGACCTGTC
CGGCGTCTGG CGAACACGAT GTTGAAGGCT TTCGATATTC AGTTCGACTT CTATGCCGCC
GATGGCAGTG ACGTGGAATC GATGATCAAA ACCAACACGC GGATGATCTA CGCCGAAGTA
CCGGGCTCGC TGACCTTCGA GATGTGCGAC CTGCCCGCCC TGGCGCAGTT GTGCAAAGCG
AAGAGCATGC TATTGGCGGT GGATAACTCC TGGGGTTCCG GGGTTTTATA CAAGCCGCTG
GAGCTGGGCG CGGACATCTC GCTGATGGCC CTGACCAAAT ACATGGCCGG GCACTCGGAT
GTGATGATGG GCAGTGTCAG TACCACCCAA ACTCACTGGC AAACCCTCAA GACCATGAAC
ACCGCTGTCG GCAACACCGT CAGCCCGGAT GACGCCTATC TGGTGCTACG CGGGGCGCGC
AGTCTGGCGG CACGCATGGC CATGCACGAA CGCCACGCGA TGCAGGTCGC GCAATGGCTG
CAGGATCAGC CTGAAGTCGC GCGCGTTCTG TATCCCGCGC TGCCGAGCGA TCCGGGGCAC
GCCCTCTGGA AACGCGATTT CCATGGTTGC AACGGCTTGC TCAGTTTCGA GTTCAAAACG
GCTGATCGGC AGGTGCTGGA TCGTTTTACA GGTGCCTTGA CGCTGTTTGG CATCGGTTAT
TCCTGGGGCG GTTTTGAAAG CCTGGTCACG GAAATCGAGC AGCATGGTCC AGACCGCGGT
ATGGGGCCTA TGCTGCGGCT GCAGGTTGGC CTTGAAAGCC CGGATGATCT GATCGCCGAC
TTGCAGAACG GGTTTGCTGC GGGTTGA
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| Protein sequence | MPHSKDPRAH TALSQRGRSA SSGPGLAVNP PVVRLSTVVF DSLESLREAE VRTAGPERSL
TYGANGNPTA FALQDLISEL EGAHGTCLYP TGLAAVAQMF QSFLRPGDHV LLTESVYGPV
RRLANTMLKA FDIQFDFYAA DGSDVESMIK TNTRMIYAEV PGSLTFEMCD LPALAQLCKA
KSMLLAVDNS WGSGVLYKPL ELGADISLMA LTKYMAGHSD VMMGSVSTTQ THWQTLKTMN
TAVGNTVSPD DAYLVLRGAR SLAARMAMHE RHAMQVAQWL QDQPEVARVL YPALPSDPGH
ALWKRDFHGC NGLLSFEFKT ADRQVLDRFT GALTLFGIGY SWGGFESLVT EIEQHGPDRG
MGPMLRLQVG LESPDDLIAD LQNGFAAG
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