Gene PSPTO_0587 details

Gene Information

• Locus tag: PSPTO_0587
• ID: 1182198
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas syringae pv. tomato str. DC3000
• Kingdom: Bacteria
• Replicon accession: NC_004578
• Strand: +
• Start bp: 645345
• End bp: 647486
• Gene Length: 2142 bp
• Protein Length: 713 aa
• Translation table: 11
• GC content: 54%
• IMG OID: 637391954
• Product: site-specific recombinase, phage integrase family
• Protein accession: NP_790434
• Protein GI: 28867815

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.277483
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCTACG TGCCATTTGA TGTGGATCAT TATGAGCGTC AAGAGGAATT GTCGGATCTG 
GAGCGGACTA TACTCTCGAA TCGTCGGTAT CGTTCTGACT GGGCCTATCT ACAATCGAGT 
GTACCCAGAC TCGTTATTCC TCTAATTGAT CTCGTGGCAC ACGCTGGCGT TTCGGATCGA 
TTGGCGGTCT CCTCTGTGTC CGTCATTCTC TGGTACGTTA GTAGGACTGA TATCCCCTAT 
TGGTCTTGGT CAGAAATGCA GTGGCTGGCT CTCCTCGATA CCCAAGCTGG GTCGCGCCCT 
TATCTGGCAG CAGTCGCATA CCACATGGGA GGTTTTCGTA CGCCAAAGCG CATTACCAAA 
TTTCGCCAAT CTGCGATTTA TGCATCATTC ATTTTCGGGC ACAAGATATT CAAGGATGAG 
CTCACTCGTT TAAGCACGGT TTTGAAATCA CTGGGCTACA CAGCGCGTCA TCTTGAAAAA 
TTCCTGAGTG GCGTGCTGGC GGCATTGATG TTGGAAAACG GCGACCCTCG GCTTGAAACT 
TTCACGGAAG TGCTTTTGAT TAAAGGCCAA GGCCATCGAA GCGTGGGCAT TGCCAGGCTG 
GTTGGCAAAG TCTCCCATGG TCTAGCTGCG CTGGGTATTC TGGATAAACC GTTACGCAAG 
CGTGGCTATG CTGACTGGCG TGAAAAGAGT ATCGAGGGTA TTGACCCTGT CTGGGTCAGT 
TGGTGTCGTC GCTGGCGAGA CACCTCAACC TTACGTCCCC GGACACGGGA AAGTAACTAC 
AGCTTCATGT TGAGAACCGG CATCTGGTTG ACGCGCGAGC AGCCGTGGGT GAGCTCCCCC 
GTCGATTGGA ACACATCAAC CTGCGCGGCC GTCATCGCGG CGATTGACCG GATGACCGTT 
GGTGAGTGGG CTTTGGAGTC AGCGCTCGGT ACGAAATTGA AAGGACTTGG TCAACCGATT 
GCACCGAACT CAAAACGAGC GTTTCTGCAT GCCTTACGCC GTTTTTTCAT CGACTTTGAA 
CTGTGGGGCT GGGGACGCCT AAAGTTCAGC CCCCGTCATT ACCTGGCCAC ACCCCGTACT 
GTGGCGTTCA ACTCGGGTAT CAATCCACGC GTTATCGACG ACTCCAGCTG GCTCAAGCTT 
ATCTGGGCGA GCCTAAACCT GGAGCGTAAG GATTTGCTCT CGGAAACTCA CTACCCCTTG 
GCGATGGTTC AGGCGGCGTC TGTGGTGTGG ACACACACCG GGCTACGCAG TAATGAAATT 
ATGCGGTTGT CCGTGGGGTG TGCGCATGCC CAGCCCCATG AGGTGGTACA CGAAGACGGA 
ACCACAATTC CGCCAGGGAC CTTGTGCTAC CTCGATATTC CAGCCAGCAA GACGTTCAAG 
GCTTTTGTCA AACCTGTGGC GGTGGTGGTT AAAGAGCGAA TCGACGTCTG GCTTCAAGAA 
AGACCGGTGA ACCAGGCACC GCTTGTGGAT GAACGAACCG GGGAGAAGGT CAGTTACCTT 
TTTCAGTTTC GGGGCAAGCG CATGGGCGCG GGCGTCATCA ACCGTACGAT TATCCCGATG 
CTATGTGCAA AGGCCGGTGT CCCGCTAGAC GATAGTCGGG GTCGTATTAC CAGCCATCGG 
GGGCGCGCCT CGGTCGTGAC TGCATTGGCG AGTGTTCCAC AGGGTATGTC GCTAATGGAG 
CTTATGCAGT GGTCCGGGCA CAGTTCGCCC AGTTCTACGC TCCATTACAT CCGCATCCGC 
CCCACCAAGC TGGCGGCATC ATTTGTTAGA GCGGATCAAA TGTCGCACAT GGTGTCAGTG 
CTTATCGACC ACGACGTAAT CGCGCGCCAT TCATCTGACC CCTATACCTT TTATGATCTG 
GGCGATTCGT ACTGTTCAAA TCCGTTCTGG AGCAGTTGTC CCCATCGAAT GGCGTGTGCC 
GGCTGTGATT TTAATGTCCC TAAAGCCAGC GCCCGAGCGC AGGCCTTGGA AAGTAAAGCA 
TCCATCGGAC ATTACTTGGA GGCCGTGCCT CTAACTGCCG ATGAGCGGGC TATTGTCGAA 
GGTGACCTAG CAAAATTGGA TGGGCTTATA CGCAAGCTCG ATGATGTACC GACGCTGGAT 
GGCAGAACGC CCAGTCAAAT CGAGGCGAAA AAAAATCGAT AA 

 

Protein sequence

MSYVPFDVDH YERQEELSDL ERTILSNRRY RSDWAYLQSS VPRLVIPLID LVAHAGVSDR 
LAVSSVSVIL WYVSRTDIPY WSWSEMQWLA LLDTQAGSRP YLAAVAYHMG GFRTPKRITK 
FRQSAIYASF IFGHKIFKDE LTRLSTVLKS LGYTARHLEK FLSGVLAALM LENGDPRLET 
FTEVLLIKGQ GHRSVGIARL VGKVSHGLAA LGILDKPLRK RGYADWREKS IEGIDPVWVS 
WCRRWRDTST LRPRTRESNY SFMLRTGIWL TREQPWVSSP VDWNTSTCAA VIAAIDRMTV 
GEWALESALG TKLKGLGQPI APNSKRAFLH ALRRFFIDFE LWGWGRLKFS PRHYLATPRT 
VAFNSGINPR VIDDSSWLKL IWASLNLERK DLLSETHYPL AMVQAASVVW THTGLRSNEI 
MRLSVGCAHA QPHEVVHEDG TTIPPGTLCY LDIPASKTFK AFVKPVAVVV KERIDVWLQE 
RPVNQAPLVD ERTGEKVSYL FQFRGKRMGA GVINRTIIPM LCAKAGVPLD DSRGRITSHR 
GRASVVTALA SVPQGMSLME LMQWSGHSSP SSTLHYIRIR PTKLAASFVR ADQMSHMVSV 
LIDHDVIARH SSDPYTFYDL GDSYCSNPFW SSCPHRMACA GCDFNVPKAS ARAQALESKA 
SIGHYLEAVP LTADERAIVE GDLAKLDGLI RKLDDVPTLD GRTPSQIEAK KNR