| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0520 |
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| Symbol | |
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| ID | 1182129 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 568236 |
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| End bp | 569312 |
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| Gene Length | 1077 bp |
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| Protein Length | 358 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637391887 |
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| Product | hypothetical protein |
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| Protein accession | NP_790368 |
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| Protein GI | 28867749 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1289] Predicted membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGAATT CGCGCTCTGC TTTCATACCC TCCTGGCTTC GCCCTGTTCT GCGTCCTTTG
CTGGATCCGT ATCGCCGTTA CCGGCATGCG CGGCTGATCC ATGCGGCGCG GATTGCGGTG
GGGTTGCTGG TAACCATCCT GCTGACCACG GGCCTGAATT TGCCGCATGG CGAATGGGCG
TCGGTGACCA TGCTGATCGT GATCGGCGGT TTGCAGCATC ACGGCAATAT CGGCAAAAAG
TCAGTCGAAC GGGCCTACGG GACGCTGATC GGCGCCGGGC TCGGCCTGAT TGTGGTGGTG
CAGCAGGGTT ATCTGGAAAT GCCGCTGCTG ACCTACGCAA TGATGTCGGT GCTGTGCGGC
TTTTTCGCCT ATCACGCCAT CGGCAAGGGC GGCTACACCG CGCTGCTCTC GGCGATTACG
CTGTTTATCG TTGCCGGACA CGGTTACAAC CCGATCAGCG ACGGGCTGTG GCGCACGGTA
GATATCCTGA TTGGTATCGC GCTGGCGCTG GCCTTCTCCT TCGCGCTGCC GTTGTACGCC
GTGTTTTCGT GGCGCTACAA CCTGGCCAGC GGCCTGCGTG ACTGCGCCAA GGTGTACGGA
CGCATTGTGC AAGGCCAGCC GGTCACCGCT GACGAGCACC TCAAGCTCAC GGCCAGGCTC
AACGCCACGA TGCTGCAATT GCGCTCGCTG CTGCCGTCGG TCTCCAAGGA AGTGAAGATG
TCCATGGTCG AACTGGACGC CATTCAGGGG CATTTCCGCA TGTGCCTGAG CACCCTGGAA
ATTCTCGCCA ACATTCGTCC TGCCGACCTG GACAAGGTGG CGGGTGAATC GTTGAAAGCC
TCGCTGGACG GCGATTACCG GCAGATCCGT CGGCAGTTGA TCGGCATGGC TCGCGCGCTG
CAAACCGGCG CGACCGAGCG CTTGATACGT ACGCCTGAAA CGACTGAAAC GCCAGCGGTG
CAGCCAGTCA TACCGGCCGA ATTGATGGGC TATCACTTGA TGACTCAGCA ACTGGCGCAG
AACCTCGACG GCTTGCAGGC ACGTCTGGCC AAGACCGCCA AACGCTGGAA GTTCTGA
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| Protein sequence | MTNSRSAFIP SWLRPVLRPL LDPYRRYRHA RLIHAARIAV GLLVTILLTT GLNLPHGEWA
SVTMLIVIGG LQHHGNIGKK SVERAYGTLI GAGLGLIVVV QQGYLEMPLL TYAMMSVLCG
FFAYHAIGKG GYTALLSAIT LFIVAGHGYN PISDGLWRTV DILIGIALAL AFSFALPLYA
VFSWRYNLAS GLRDCAKVYG RIVQGQPVTA DEHLKLTARL NATMLQLRSL LPSVSKEVKM
SMVELDAIQG HFRMCLSTLE ILANIRPADL DKVAGESLKA SLDGDYRQIR RQLIGMARAL
QTGATERLIR TPETTETPAV QPVIPAELMG YHLMTQQLAQ NLDGLQARLA KTAKRWKF
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