| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0485 |
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| Symbol | |
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| ID | 1182094 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 531564 |
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| End bp | 532583 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637391853 |
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| Product | transcriptional repressor, LacI family |
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| Protein accession | NP_790334 |
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| Protein GI | 28867715 |
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| COG category | [K] Transcription |
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| COG ID | [COG1609] Transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.614525 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGATT TGAAAGATGT TGCACGCCTG GCCGGCGTTT CCCGAGCCAC CGCTGCACGC
GCGTTCGCAA GCCCCAAGGT GGTACGTATC GAGACCCGTG AGCGCGTGTT CGCCGCTGCC
CGTGAACTGG GTTTTCGACC CAACCGGTTG GGCAGGCAGT TACGCTTGCA AACCACCAAT
CTGATTGGCG TCATCGTGCC AAACCTGCTC AACCCGGTGT TTGCCGAGCA GTTTCAGGCC
ATGGAACGGG CGGCCCGTGC GCGAGGCTAC AACCTGTTGC TGGCGACCAC CGACTACAGC
GCCGAACGTG AAAGCGCCGT GGTTGAAGAG CTGCTGCGCC AGCGGGTCGA CGGGTTGGTG
CTGACGGTGA CGGACGCCGA GCATAACCGT GTGCTGGAGA GTCTGGTCAG TGAGGACACG
CCGTTCGTGC TGGCTTATCA CCAGACCGAC AATGAGGATT ACAGCGCCGT GTCTGTGGAT
AACCGCGCAG GCATGGCACT GGCGACACAG TACCTGATCG ATGCCGGCCA CCAGCGTATT
GCCATGGTTG CCGGCCCGGT CATGCAGTCC GACCGCGCCC GCCTGCGTTA CGAAGGCTAC
CGCGATGCCA TGAACGAGCG TGGGCTTGAG GCGCGGCCAG TGATCGAAAT GCCGGCACAT
ACCAACGCCG AGTTTGCCGC GCTCGAACCC TTGCTGCGCG GCCCGAACGC ACCCAGCGCG
TTGGTCTGCT CCAACGATTT GCTGGCCATC AGCCTGATTG CCGAATTGCG CCGCCATGGC
TGGGGCGTGC CCGAACGCCT GTCGGTCATC GGCTTTGACG GCATTGCGCT GGGCACTCAG
ATGCACCCCA CGCTGTGCAG TGTGGTTCAG CCCATCGCCG AACTGGCGCA CACCGTCATC
GAACAATTGC TGGCCCGGAT TGCCGGCGCC GCAGCGGCTT CTCATTGTCT GCCGTGCCAT
ATCCGGCCCG GTGAAAGCAC CCAGCCCTAC CAGGAGATGC TTCATGTTCA GCCTCAGTAA
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| Protein sequence | MTDLKDVARL AGVSRATAAR AFASPKVVRI ETRERVFAAA RELGFRPNRL GRQLRLQTTN
LIGVIVPNLL NPVFAEQFQA MERAARARGY NLLLATTDYS AERESAVVEE LLRQRVDGLV
LTVTDAEHNR VLESLVSEDT PFVLAYHQTD NEDYSAVSVD NRAGMALATQ YLIDAGHQRI
AMVAGPVMQS DRARLRYEGY RDAMNERGLE ARPVIEMPAH TNAEFAALEP LLRGPNAPSA
LVCSNDLLAI SLIAELRRHG WGVPERLSVI GFDGIALGTQ MHPTLCSVVQ PIAELAHTVI
EQLLARIAGA AAASHCLPCH IRPGESTQPY QEMLHVQPQ
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