| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0408 |
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| Symbol | |
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| ID | 1182017 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 453914 |
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| End bp | 455239 |
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| Gene Length | 1326 bp |
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| Protein Length | 441 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637391776 |
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| Product | hypothetical protein |
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| Protein accession | NP_790257 |
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| Protein GI | 28867638 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0312] Predicted Zn-dependent proteases and their inactivated homologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGCACC AACAGCAATT CGAGGCGCTG GTCGCCGTGC TCAAGGCTGC CATCAGCCCG
ACCGAACACT TCACCCTGGC TTACGACGCC GAAGCGTCGG ACTTCATTCG CTTCAACCAC
GGCCAGGTAC GCCAAGCCGG CCGCGTGCAG CAGGTCATCG CGACGTTCAA GCTGATCAAT
GACGGGCGGC ATGCCAACCT GGAAGTGACA CTTTCAGGCG ATTCAGAGAC AGACACCCAG
CGCCTGACCG ACGCTCTGCA GCAATTGCGC GAAACGCTGC CTGCCTTGGC GAAAGACCCG
TATCTGCTGC CCAACACCGA GGCCTGGCAG AGCAGTAATG TTCAGGACCT GCCGCTGCCC
GACAGCGCAC AGGTCGTCGA GCAGATCTGC GAGTTATCGG GCGAACTGGA CCTGGTGGGT
TTTTATGCCG CAGGTCCGCT GTATCGGGGC TTCGCCAGTT CCTGGGGCGC GTTGGGCTGG
CATCAGGCCA ACAGCTTCAA TTTCGACTGG AGCCTGTTTC ATGAGAACGG GCAGGCGGTG
AAAGCCAACT ATGCCGGTCA TCACTGGAAC AATGAGGCCT TCGTAAGACG TTTCGAGCAG
GCGCGTGAGC AACTGGAGTT TCTCGGTCGC CCGCTGCACA CCCTTGAACC AGGCCAATAC
CGCGCCTATC TGGCCCCGGC AGCCGTTGAC GAAATCATCG GCATGCTCAC CTGGGGTGGC
TTCTCCGCGC AGGCGCTGGC CAGCAAACGC AGCCCGCTGC AACGGCTGTA TGACGGTGAT
ACCCGGTTCA GCCCGTTATT CAATGTCGAG GAGCACGTCA GTGGCTCGCT TTCGCCGGCG
TTCTCGCGCG AAGGCTACCC GCGCAAGGAC CTGACACTGA TCGTCGACGG TCAGGCCCGT
GAGCGATTGG TGGATTCAAG CAGCGCTGCC GAATACGACC TGCCCGCCAA TGGCGCGGAT
TACGGTGAAG GGCCCAGCGC GCTGGACATT GCCGGTGGTT CGCTGGAGCT CGATCAGGTG
CTTGAAAAGC TGGGCACAGG TCTTTACATC AGCAACCTGT GGTACCTGAA CTTCTCGGAC
AGAGCCGCCG CGCGTCTGAC CGGCATGACA CGTTTCGCAA CGTTTTGGGT CGAAGAGGGC
AGGATCGTCG CACCGGTCAG CACCATGCGC TTCGATGACA GCGCCTACAG CCTGTTAGGC
AGCGCGCTGG AAGACCTGAC CCGCGAGCGG GAACTGATCC TGCAATCGAG TACCTACACT
CAGCGCCAGA CCGGCTCCAT TCAACTGCCG GGTGCGCTGG TCAGCCATAT CACTTTCACG
TTATAG
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| Protein sequence | MSHQQQFEAL VAVLKAAISP TEHFTLAYDA EASDFIRFNH GQVRQAGRVQ QVIATFKLIN
DGRHANLEVT LSGDSETDTQ RLTDALQQLR ETLPALAKDP YLLPNTEAWQ SSNVQDLPLP
DSAQVVEQIC ELSGELDLVG FYAAGPLYRG FASSWGALGW HQANSFNFDW SLFHENGQAV
KANYAGHHWN NEAFVRRFEQ AREQLEFLGR PLHTLEPGQY RAYLAPAAVD EIIGMLTWGG
FSAQALASKR SPLQRLYDGD TRFSPLFNVE EHVSGSLSPA FSREGYPRKD LTLIVDGQAR
ERLVDSSSAA EYDLPANGAD YGEGPSALDI AGGSLELDQV LEKLGTGLYI SNLWYLNFSD
RAAARLTGMT RFATFWVEEG RIVAPVSTMR FDDSAYSLLG SALEDLTRER ELILQSSTYT
QRQTGSIQLP GALVSHITFT L
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