| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0400 |
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| Symbol | |
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| ID | 1182009 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 441859 |
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| End bp | 443655 |
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| Gene Length | 1797 bp |
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| Protein Length | 598 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 637391768 |
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| Product | chitinase |
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| Protein accession | NP_790249 |
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| Protein GI | 28867630 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3469] Chitinase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000106126 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCAACC CAAAAATCAT CAATCAATAT AAAAACAAGA AAGTCGACGC AGCCTCTGAC
ATGCCGGATA TAAGAGGCAA AAATATTCTC ATGGGCTTCT GGCACAACTG GCCTTCCGAA
CCCGGCCAGG GCTACCAGCA GGGCTTGTTC AAGGAGATGC AACTGACCGA TATACCCGAA
GCGTATAACG TCGTGGCAGT GGCTTTCATG AAAGGCGCCG GCATTCCCAC CTTCAAGCCT
TATAACCTCA GTGACGAGGC GTTTCGCGCC CAAGTGGCAG CACTGAATGC ACAAGGCCGT
GCGGTGCTGA TTTCTCTTGG CGGCGCTGAT GCGCACATTG AGCTGCACGC GGGCCAGGAA
GAACCACTGG CCTATGAAAT TATTCGCCTG GTTGAAGTCT ACGGCTTTGA CGGGCTGGAC
ATCGACCTTG AGCAGGCCGC TATCACGTTT GCTGATAACC GTACGGTATT GCCAGCGGCG
CTGAGGATGG TGCGCGAACA CTACGAAACG GAAGGCAAGC ACTTCATTAT CAGCATGGCC
CCGGAGTTTC CTTACCTGAG AGCCAGCAAG AAACTTCCTG CCTTGAAAGA GATCACCACC
TACTTCCCTA TCCTCAAGGA GTTTGTGACG TTCCTCGAAT CGTTTAGAAG CGGCGGTGCC
TACCTCGCTT ATATCAATGC ACTGGAAGAC ATCTATGACT TTATCGCGCC GCAGTATTAC
AACCAGGGCG GCGATGGCAT ATGGGTCGAA GAGCTGAACC TGTGGGTCAC TCAAAACAAC
GACGCCCACA AGAAAGCGTT TCTTTACTAT CTGACCGACA GTTTGATCCA CGGTACGCGT
GGCTTCACTA AAATTCCGGC CGACAGACTG GCCATTGGTC TACCGACCAA CAATGACGCC
GCCGCTACCG GTTACGTCAT TAACCCACAG GACGTCAAAG ACGCACTGCA AGAACTGAAA
GATGCTGGCA ACCCCATCCG CGGGCTGATG ACCTGGTCTG TCAACTGGGA TGCGGGCAAG
GACAAGACCG GCAAGGACTA CAATTGGGAG TTCGTGAACC GCTACGGCTA CCTCACCGGC
GGCGAAACAC CTGTGCCGGA TAAACCTCCA GCGCCTGCTG ACCTGACATT GTCATGGCAG
ACCAAGGATT CGGTAACGCT GATATGGAGG CTTTCGGAAG GTGCACACCC GATCCGAGTC
TATAATTTGT TCAAAAACGG CACGCCTGTA GGCGACCCAA CGGCGCCACC GTTTGTCGAT
ACAGATGTTT CACCTGGCGC TGTCTACGAT TATCAGATCA GCGCGACTGA CATTGAGGGG
AATACATCGG ACCTGTCCAC AGTGCTGACT GTGTACATGG ATCACGATCA ACCGCCATCA
GCACCCACTG ATCTTAAAGC AACGGATATC ACTGCTTACA GCGTGTCCCT TGAGTGGACA
GCTCCCTCAG GGCCACATCG CATCAAGCAG TATATTGTTT ACCGAAATCG GATGCGCCTT
ATTACAGTCA CCGCGCCACA AACCACCTAC ACCGACGCTG GACTTACGCC TGAAACTGAT
TATGTTTACG AGATCAGCGC GCAGGACAAA GATGACGCTG TTTCCGCTGG AAGCGAATCT
CTGACCGTCA CGACTGAGCT CGACAGCGGC GGTAATGTTA CGGTGTGGGC GCCAGGCGTG
CAGTATCAGG CAGGCAACGA GGTGACTCAT CAGGGCATTA GCTACAGATG CCTTCAGTCC
CATAAGTCAA TCCCGGAATG GTCCCCGGAG CTACCTGGCT CTGCGTCCTT GTGGTAG
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| Protein sequence | MLNPKIINQY KNKKVDAASD MPDIRGKNIL MGFWHNWPSE PGQGYQQGLF KEMQLTDIPE
AYNVVAVAFM KGAGIPTFKP YNLSDEAFRA QVAALNAQGR AVLISLGGAD AHIELHAGQE
EPLAYEIIRL VEVYGFDGLD IDLEQAAITF ADNRTVLPAA LRMVREHYET EGKHFIISMA
PEFPYLRASK KLPALKEITT YFPILKEFVT FLESFRSGGA YLAYINALED IYDFIAPQYY
NQGGDGIWVE ELNLWVTQNN DAHKKAFLYY LTDSLIHGTR GFTKIPADRL AIGLPTNNDA
AATGYVINPQ DVKDALQELK DAGNPIRGLM TWSVNWDAGK DKTGKDYNWE FVNRYGYLTG
GETPVPDKPP APADLTLSWQ TKDSVTLIWR LSEGAHPIRV YNLFKNGTPV GDPTAPPFVD
TDVSPGAVYD YQISATDIEG NTSDLSTVLT VYMDHDQPPS APTDLKATDI TAYSVSLEWT
APSGPHRIKQ YIVYRNRMRL ITVTAPQTTY TDAGLTPETD YVYEISAQDK DDAVSAGSES
LTVTTELDSG GNVTVWAPGV QYQAGNEVTH QGISYRCLQS HKSIPEWSPE LPGSASLW
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