Gene PSPTO_0393 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_0393 
Symbol 
ID1182002 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp432854 
End bp433264 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content55% 
IMG OID637391761 
Producthypothetical protein 
Protein accessionNP_790242 
Protein GI28867623 
COG category[S] Function unknown 
COG ID[COG3755] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACGT TTTTGCTGAC CTTGGCCCTG ATGGCGACGG CTGTAACAGG CGTGCAGGCT 
GCTCAGAACC CGGACGCTTC GCCTTGTGAC GGTGTCGACG ACGACAAGCA GACCCTGGAA
TGCTCGGTTT ACAGCCGCAC GACCGCAGAA GAATTGCTTA AGGAAAATTT CAACAACCTG
CTCAAGCGTG TTCAGTCGCA GTTCGTCGCC AACAAGACGC AGTACAACGA CTTTACGAGC
AAACTCAAGA CGGCTCAGCA GGCGTGGGAA AAGCTGCGTG ATGCCGATTG CGCGGTCGAT
GTGTTCCCTT CTGCCGCCGG CAGCAAGGCG TTCACCATCA GTGAAAACGA CTGTATTGCG
CGCATGAGCG ATGAGCGTTC GGAATACCTG GAGTCGATTG CGCAGGAATA A
 
Protein sequence
MKTFLLTLAL MATAVTGVQA AQNPDASPCD GVDDDKQTLE CSVYSRTTAE ELLKENFNNL 
LKRVQSQFVA NKTQYNDFTS KLKTAQQAWE KLRDADCAVD VFPSAAGSKA FTISENDCIA
RMSDERSEYL ESIAQE