Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_0393 |
Symbol | |
ID | 1182002 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 432854 |
End bp | 433264 |
Gene Length | 411 bp |
Protein Length | 136 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 637391761 |
Product | hypothetical protein |
Protein accession | NP_790242 |
Protein GI | 28867623 |
COG category | [S] Function unknown |
COG ID | [COG3755] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAACGT TTTTGCTGAC CTTGGCCCTG ATGGCGACGG CTGTAACAGG CGTGCAGGCT GCTCAGAACC CGGACGCTTC GCCTTGTGAC GGTGTCGACG ACGACAAGCA GACCCTGGAA TGCTCGGTTT ACAGCCGCAC GACCGCAGAA GAATTGCTTA AGGAAAATTT CAACAACCTG CTCAAGCGTG TTCAGTCGCA GTTCGTCGCC AACAAGACGC AGTACAACGA CTTTACGAGC AAACTCAAGA CGGCTCAGCA GGCGTGGGAA AAGCTGCGTG ATGCCGATTG CGCGGTCGAT GTGTTCCCTT CTGCCGCCGG CAGCAAGGCG TTCACCATCA GTGAAAACGA CTGTATTGCG CGCATGAGCG ATGAGCGTTC GGAATACCTG GAGTCGATTG CGCAGGAATA A
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Protein sequence | MKTFLLTLAL MATAVTGVQA AQNPDASPCD GVDDDKQTLE CSVYSRTTAE ELLKENFNNL LKRVQSQFVA NKTQYNDFTS KLKTAQQAWE KLRDADCAVD VFPSAAGSKA FTISENDCIA RMSDERSEYL ESIAQE
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