| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0212 |
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| Symbol | lysR |
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| ID | 1181820 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 237840 |
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| End bp | 238775 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637391581 |
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| Product | transcriptional activator LysR |
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| Protein accession | NP_790063 |
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| Protein GI | 28867444 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAGTAA CGTTGCGCCA CATAGAAGTG TTCCGAGCCG TCATGACGTC AGGCAGCGTG
ACGGAAGCCG CCAACATGCT GAACACCTCT CAGCCGACGG TAAGCCGCGA GCTGGCGCGC
TTCGAATTGC TCACTCAGCT CACATTGTTC GATCGCGTAC GCGGGCGACT AAGGCCTACG
GCGCAGGCGT TGTCACTGTT CGAGGAGGTG CAGCGGGCCT ACTTCGGGTT GGGGCGTATT
CTGAGCACGG CGGCGTCACT GCGAGAGTTC GAGCACGGCC AGTTATCCAT CGCCTGCCTG
CCGGTGTTTT CACAGTCGTT GTTGCCGAAA GCGTGCCAAC GCTTTTTTGC CCAGTTCCCC
AAAGCCAGCA TGAGCATCAC GCCGCAGGAA TCACCGTTGC TGGAAGAGTG GCTGTCGGCT
CAGCGCTACG ACCTAGGGCT GACCGAAGTG GCGAGCGCGC CTCCGGGCAC AGAGCTGGTG
CCGTTGATGG TTGTGGACGA GGTGTGTGTA TTGCCCGTCG GCCATCCGCT TCTGGCAAAA
CAGGTGCTGG CACCCGAGGA CTTTGCCTCT AAACCCTTCA TCAGCCTGTC CAGCCTGGAC
AGCTACCGGC AGCAGATAGA CGAGATTTTC CGCCTGGCCC AGGTAGAGCG GCAGATGGTG
CTGGACACCC ACAGTGCCGC CTCGGTCTGC GCCATGGTAC GCGAGCGAAT CGGGCTGGCC
ATCGTCAACC CGCTCACTGC GCTGGACTTT GTCGGGCAGG GTCTGGAGAT CCGGCCGTTT
ACGGCGTCGA TACCGTTCAC GGTCAGCCTT GTCAAACCGC TGCACCGACC TGCGTCCAGG
CTGGTCGGGC TGTTTGAAGA AGCATTGCGT GAGCAAGCCT CGATCGTCGA GGCACGATTG
GCGGCGATCA ATGTGCCAAT CGCTGCCGGG CCTTGA
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| Protein sequence | MSVTLRHIEV FRAVMTSGSV TEAANMLNTS QPTVSRELAR FELLTQLTLF DRVRGRLRPT
AQALSLFEEV QRAYFGLGRI LSTAASLREF EHGQLSIACL PVFSQSLLPK ACQRFFAQFP
KASMSITPQE SPLLEEWLSA QRYDLGLTEV ASAPPGTELV PLMVVDEVCV LPVGHPLLAK
QVLAPEDFAS KPFISLSSLD SYRQQIDEIF RLAQVERQMV LDTHSAASVC AMVRERIGLA
IVNPLTALDF VGQGLEIRPF TASIPFTVSL VKPLHRPASR LVGLFEEALR EQASIVEARL
AAINVPIAAG P
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